SMTL ID : 3i5w.1

Crystal structure of human alpha-defensin 5 (mutant R13H)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.63 Å

Oligo State

homo-dimer

Ligands

1 x FLC: CITRATE ANION(Non-covalent)

FLC.1: 5 residues within 4Å: Chain A: Y.4, C.5, R.6, T.7 Chain B: A.1 6 PLIP interactions: 5 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:Y.4 Hydrogen bonds: A:T.7 Water bridges: A:R.6, A:G.8, B:A.1 Salt bridges: A:R.6

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

de Leeuw, E. et al., Selective arginines are important for the antibacterial activity and host cell interaction of human alpha-defensin 5. Febs Lett. (2009)

Release Date

2009-07-28

Peptides

Defensin-5: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Defensin-5