SMTL ID : 3i5z.1

Crystal structure of ERK2 bound to (S)-N-(2-hydroxy-1-phenylethyl)-4-(5-methyl-2-(phenylamino)pyrimidin-4-yl)-1H-pyrrole-2-carboxamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: V.34, R.35, S.49, Y.50 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.50 Salt bridges: A:R.35 SO4.2: 1 residues within 4Å: Chain A: K.68 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.68 SO4.3: 4 residues within 4Å: Chain A: R.90, R.192, V.193, F.351 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:V.193 Water bridges: A:F.351 Salt bridges: A:R.90, A:R.192 SO4.4: 4 residues within 4Å: Chain A: R.211, R.214, H.252, Y.253 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:K.251, A:Y.253 Water bridges: A:R.211, A:R.211 Salt bridges: A:R.211, A:R.214

1 x Z48: N-[(1S)-2-hydroxy-1-phenylethyl]-4-[5-methyl-2-(phenylamino)pyrimidin-4-yl]-1H-pyrrole-2-carboxamide(Non-covalent)

Z48.5: 19 residues within 4Å: Chain A: I.51, E.53, G.54, G.57, M.58, V.59, A.72, K.74, I.76, Q.125, D.126, M.128, E.129, T.130, D.131, N.174, L.176, C.186, D.187 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.51, A:A.72, A:I.76, A:L.176, A:L.176 Hydrogen bonds: A:M.128, A:M.128 Water bridges: A:S.173, A:S.173, A:N.174, A:D.187 pi-Cation interactions: A:K.74

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Aronov, A.M. et al., Structure-guided design of potent and selective pyrimidylpyrrole inhibitors of extracellular signal-regulated kinase (ERK) using conformational control. J.Med.Chem. (2009)

Release Date

2010-01-12

Peptides

Mitogen-activated protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 1

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