SMTL ID : 3i6s.1

Crystal Structure of the plant subtilisin-like protease SBT3

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 1 residues within 4Å: Chain A: N.65 No protein-ligand interaction detected (PLIP)

4 x NAG- FUC- NAG: alpha-L-fucopyranose-(1-3)-[2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-functional Binders)

NAG-FUC-NAG.2: 1 residues within 4Å: Chain A: N.91 No protein-ligand interaction detected (PLIP) NAG-FUC-NAG.3: 4 residues within 4Å: Chain A: N.264, T.266, L.275, Q.278 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.278, A:Q.278 NAG-FUC-NAG.5: 2 residues within 4Å: Chain B: T.89, N.91 No protein-ligand interaction detected (PLIP) NAG-FUC-NAG.6: 4 residues within 4Å: Chain B: N.264, T.266, L.267, Q.278 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:Q.278

1 x NAG- FUC: alpha-L-fucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-FUC.4: 2 residues within 4Å: Chain B: N.65, S.67 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.67, B:S.67

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ottmann, C. et al., Structural basis for Ca2+-independence and activation by homodimerization of tomato subtilase 3. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2010-01-19

Peptides

Subtilisin-like protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Subtilisin-like protease

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