SMTL ID : 3i8d.1 (1 other biounit)

The Pairing Geometry of the Hydrophobic Thymine Analog 2,4-Difluorotoluene in Duplex DNA as Analyzed by X-ray Crystallography

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.61 Å

Oligo State

homo-dimer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: Y.22, L.50, V.53, H.54, R.57, A.104 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Y.22, A:R.57 GOL.2: 6 residues within 4Å: Chain C: Y.22, L.50, V.53, H.54, R.57, A.104 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:Y.22, C:R.57

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pallan, P.S. et al., Pairing geometry of the hydrophobic thymine analogue 2,4-difluorotoluene in duplex DNA as analyzed by X-ray crystallography. J.Am.Chem.Soc. (2009)

Release Date

2009-09-01

Peptides

Ribonuclease H: AC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
A

Ribonuclease H

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