SMTL ID : 3i91.1 (1 other biounit)

Crystal structure of human chromobox homolog 8 (CBX8) with H3K9 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

1 x GLN- THR- ALA- ARG- M3L- SER- THR- GLY: H3K9 peptide(Non-covalent)

GLN-THR-ALA-ARG-M3L-SER-THR-GLY.1: 13 residues within 4Å: Chain A: R.2, V.3, F.4, A.5, A.6, W.25, W.28, E.36, N.40, L.42, D.43, R.45, L.46 22 PLIP interactions: 22 interactions with chain A Hydrophobic interactions: A:V.3, A:F.4, A:W.25, A:W.25, A:D.43 Hydrogen bonds: A:R.2, A:F.4, A:F.4, A:A.6, A:E.36, A:N.40, A:N.40, A:L.42, A:D.43 Water bridges: A:R.2, A:D.43, A:D.43, A:D.43, A:D.43 pi-Cation interactions: A:F.4, A:W.25, A:W.28

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kaustov, L. et al., Recognition and specificity determinants of the human cbx chromodomains. J.Biol.Chem. (2011)

Release Date

2009-09-08

Peptides

Chromobox protein homolog 8: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Chromobox protein homolog 8

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