SMTL ID : 3ibj.1

X-ray structure of PDE2A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.02 Å

Oligo State

homo-dimer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.447, H.483, D.484, D.595 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.447, A:H.483, A:D.484, A:D.595 ZN.3: 5 residues within 4Å: Chain B: H.447, H.483, D.484, D.595 Ligands: MG.4 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:H.447, B:H.483, B:D.484, B:D.595

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: D.484, T.555 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.484 MG.4: 2 residues within 4Å: Chain B: D.484 Ligands: ZN.3 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:D.484

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pandit, J. et al., Mechanism for the allosteric regulation of phosphodiesterase 2A deduced from the X-ray structure of a near full-length construct. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2009-10-27

Peptides

cGMP-dependent 3',5'-cyclic phosphodiesterase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

cGMP-dependent 3',5'-cyclic phosphodiesterase