SMTL ID : 3ic3.1 (2 other biounits)

Structure of a putative pyruvate dehydrogenase from the photosynthetic bacterium Rhodopseudomonas palustrus CGA009

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 2 residues within 4Å: Chain A: R.41 Chain B: R.66 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:R.41, B:R.66, B:R.66 EDO.2: 4 residues within 4Å: Chain A: A.42, F.43, E.44 Chain B: E.67 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:F.43, A:E.44, B:E.67 EDO.5: 5 residues within 4Å: Chain A: V.30, G.33, G.34 Chain B: M.48, L.51 No protein-ligand interaction detected (PLIP)

2 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.3: 2 residues within 4Å: Chain B: H.59, R.62 3 PLIP interactions: 3 interactions with chain B Water bridges: B:R.66 Salt bridges: B:H.59, B:R.62 PO4.4: 3 residues within 4Å: Chain A: T.91 Chain B: R.62, E.72 4 PLIP interactions: 1 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:T.91, B:E.72, B:E.72 Salt bridges: B:R.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cuff, M.E. et al., Structure of a putative pyruvate dehydrogenase from the photosynthetic bacterium Rhodopseudomonas palustrus CGA009. TO BE PUBLISHED

Release Date

2009-09-22

Peptides

putative pyruvate dehydrogenase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

putative pyruvate dehydrogenase

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