SMTL ID : 3ida.1

Thermostable Cocaine Esterase with mutations L169K and G173Q, bound to DTT adduct

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

6 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 3 residues within 4Å: Chain A: R.297, K.298, R.472 Ligand excluded by PLIP CL.8: 2 residues within 4Å: Chain A: E.344, W.345 Ligand excluded by PLIP CL.9: 1 residues within 4Å: Chain A: G.365 Ligand excluded by PLIP CL.13: 3 residues within 4Å: Chain B: R.297, K.298, R.472 Ligand excluded by PLIP CL.20: 2 residues within 4Å: Chain B: E.344, W.345 Ligand excluded by PLIP CL.21: 1 residues within 4Å: Chain B: G.365 Ligand excluded by PLIP

2 x DBC: (4S,5S)-4,5-BIS(MERCAPTOMETHYL)-1,3-DIOXOLAN-2-OL(Covalent)

DBC.2: 8 residues within 4Å: Chain A: Y.44, S.117, Y.118, W.166, F.261, H.287, L.407 Ligands: GOL.6 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.44, A:Y.44, A:Y.118 Water bridges: A:K.169 DBC.14: 8 residues within 4Å: Chain B: Y.44, S.117, Y.118, W.166, F.261, H.287, L.407 Ligands: GOL.18 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:Y.44, B:Y.118 Water bridges: B:K.169

16 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 6 residues within 4Å: Chain A: V.281, P.306, E.309, A.310, R.336, W.345 Ligand excluded by PLIP GOL.4: 3 residues within 4Å: Chain A: G.540, E.545, E.549 Ligand excluded by PLIP GOL.5: 9 residues within 4Å: Chain A: L.196, N.197, D.198, V.199, F.408, H.409, N.410 Chain B: R.293 Ligands: GOL.11 Ligand excluded by PLIP GOL.6: 4 residues within 4Å: Chain A: Y.44, S.117, K.169 Ligands: DBC.2 Ligand excluded by PLIP GOL.7: 3 residues within 4Å: Chain A: T.380, I.571, K.573 Ligand excluded by PLIP GOL.10: 10 residues within 4Å: Chain A: R.148, A.149, P.150, W.151, Y.152, S.159, G.260, T.405, K.531, Y.532 Ligand excluded by PLIP GOL.11: 9 residues within 4Å: Chain A: S.288, L.407, F.408, H.409, N.410, G.411, D.412 Chain B: R.293 Ligands: GOL.5 Ligand excluded by PLIP GOL.12: 4 residues within 4Å: Chain A: S.372, S.431, V.467, R.519 Ligand excluded by PLIP GOL.15: 6 residues within 4Å: Chain B: V.281, P.306, E.309, A.310, R.336, W.345 Ligand excluded by PLIP GOL.16: 3 residues within 4Å: Chain B: G.540, E.545, E.549 Ligand excluded by PLIP GOL.17: 9 residues within 4Å: Chain A: R.293 Chain B: L.196, N.197, D.198, V.199, F.408, H.409, N.410 Ligands: GOL.23 Ligand excluded by PLIP GOL.18: 4 residues within 4Å: Chain B: Y.44, S.117, K.169 Ligands: DBC.14 Ligand excluded by PLIP GOL.19: 3 residues within 4Å: Chain B: T.380, I.571, K.573 Ligand excluded by PLIP GOL.22: 10 residues within 4Å: Chain B: R.148, A.149, P.150, W.151, Y.152, S.159, G.260, T.405, K.531, Y.532 Ligand excluded by PLIP GOL.23: 9 residues within 4Å: Chain A: R.293 Chain B: S.288, L.407, F.408, H.409, N.410, G.411, D.412 Ligands: GOL.17 Ligand excluded by PLIP GOL.24: 4 residues within 4Å: Chain B: S.372, S.431, V.467, R.519 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brim, R.L. et al., A thermally stable form of bacterial cocaine esterase: a potential therapeutic agent for treatment of cocaine abuse. Mol.Pharmacol. (2010)

Release Date

2010-03-02

Peptides

Cocaine esterase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Cocaine esterase