SMTL ID : 3idz.1 (3 other biounits)

Crystal Structure of S378Q mutant TTHA0252 from Thermus thermophilus HB8

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

22 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: L.88, R.263 Ligands: SO4.20 Ligand excluded by PLIP SO4.2: 4 residues within 4Å: Chain A: P.172, D.173, S.269, E.270 Ligand excluded by PLIP SO4.3: 3 residues within 4Å: Chain A: H.238, H.240, R.241 Ligand excluded by PLIP SO4.4: 8 residues within 4Å: Chain A: Y.189, F.223, R.227, G.340, Y.341, Q.378, G.379, H.380 Ligand excluded by PLIP SO4.5: 7 residues within 4Å: Chain A: H.61, L.142, F.223, A.224, V.225, E.226, R.227 Ligand excluded by PLIP SO4.6: 5 residues within 4Å: Chain A: K.298, N.301, H.323, K.326, H.327 Ligand excluded by PLIP SO4.7: 1 residues within 4Å: Chain A: R.73 Ligand excluded by PLIP SO4.8: 2 residues within 4Å: Chain A: G.318, G.319 Ligand excluded by PLIP SO4.9: 1 residues within 4Å: Chain A: R.24 Ligand excluded by PLIP SO4.10: 2 residues within 4Å: Chain A: R.354, R.368 Ligand excluded by PLIP SO4.11: 2 residues within 4Å: Chain A: P.243, R.244 Ligand excluded by PLIP SO4.12: 3 residues within 4Å: Chain A: M.1, R.2, E.153 Ligand excluded by PLIP SO4.13: 4 residues within 4Å: Chain A: R.24, R.128, L.129, G.130 Ligand excluded by PLIP SO4.14: 7 residues within 4Å: Chain A: D.250, S.251, P.252, A.311, G.312, G.319, R.320 Ligand excluded by PLIP SO4.15: 3 residues within 4Å: Chain A: R.25, F.47, D.48 Ligand excluded by PLIP SO4.16: 3 residues within 4Å: Chain A: K.99, P.252, R.256 Ligand excluded by PLIP SO4.17: 3 residues within 4Å: Chain A: R.2, G.426, G.428 Ligand excluded by PLIP SO4.18: 2 residues within 4Å: Chain A: P.366, R.368 Ligand excluded by PLIP SO4.19: 5 residues within 4Å: Chain A: T.222, F.223, A.224, S.313, G.314 Ligand excluded by PLIP SO4.20: 3 residues within 4Å: Chain A: R.84, L.88 Ligands: SO4.1 Ligand excluded by PLIP SO4.21: 2 residues within 4Å: Chain A: P.304, R.333 Ligand excluded by PLIP SO4.22: 1 residues within 4Å: Chain A: H.293 Ligand excluded by PLIP

1 x FLC: CITRATE ANION(Non-covalent)

FLC.23: 4 residues within 4Å: Chain A: G.279, K.280, N.281, R.284 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:K.280 Hydrogen bonds: A:N.281 Water bridges: A:N.281, A:N.281 Salt bridges: A:K.280, A:K.280, A:R.284

2 x ZN: ZINC ION(Non-covalent)

ZN.24: 5 residues within 4Å: Chain A: D.63, H.64, D.162, H.400 Ligands: ZN.25 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:D.63, A:H.64, A:D.162, A:H.400 ZN.25: 5 residues within 4Å: Chain A: H.59, H.61, H.141, D.162 Ligands: ZN.24 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.59, A:H.61, A:H.141

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ishikawa, H. et al., Crystal Structure of S378Q mutant TTHA0252 from Thermus thermophilus HB8. To be Published

Release Date

2009-08-04

Peptides

Ribonuclease TTHA0252: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Ribonuclease TTHA0252

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