SMTL ID : 3igm.1

A 2.2A crystal structure of the AP2 domain of PF14_0633 from P. falciparum, bound as a domain-swapped dimer to its cognate DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

4 x DT- DG- DC- DA- DT- DG- DC- DA: 5'-D(*TP*GP*CP*AP*TP*GP*CP*A)-3'(Non-covalent)

DT-DG-DC-DA-DT-DG-DC-DA.1: 17 residues within 4Å: Chain A: R.16, M.17, L.21, F.23, R.30, R.31, S.32, R.33, T.34, H.36 Ligands: DT-DG-DC-DA-DT-DG-DC-DA.2, DT-DG-DC-DA-DT-DG-DC-DA.2, DT-DG-DC-DA-DT-DG-DC-DA.2, DT-DG-DC-DA-DT-DG-DC-DA.2, DT-DG-DC-DA-DT-DG-DC-DA.2, DT-DG-DC-DA-DT-DG-DC-DA.2, DT-DG-DC-DA-DT-DG-DC-DA.2 Protein-ligand interaction information (PLIP) not available DT-DG-DC-DA-DT-DG-DC-DA.2: 19 residues within 4Å: Chain A: M.4, S.5, P.9, G.10, S.12, W.13, N.14, K.15, R.16, F.23, Y.25, R.30 Ligands: DT-DG-DC-DA-DT-DG-DC-DA.1, DT-DG-DC-DA-DT-DG-DC-DA.1, DT-DG-DC-DA-DT-DG-DC-DA.1, DT-DG-DC-DA-DT-DG-DC-DA.1, DT-DG-DC-DA-DT-DG-DC-DA.1, DT-DG-DC-DA-DT-DG-DC-DA.1, DT-DG-DC-DA-DT-DG-DC-DA.1 Protein-ligand interaction information (PLIP) not available DT-DG-DC-DA-DT-DG-DC-DA.3: 16 residues within 4Å: Chain B: R.16, M.17, F.23, R.30, R.31, S.32, R.33, T.34, H.36 Ligands: DT-DG-DC-DA-DT-DG-DC.4, DT-DG-DC-DA-DT-DG-DC.4, DT-DG-DC-DA-DT-DG-DC.4, DT-DG-DC-DA-DT-DG-DC.4, DT-DG-DC-DA-DT-DG-DC.4, DT-DG-DC-DA-DT-DG-DC.4, DT-DG-DC-DA-DT-DG-DC.4 Protein-ligand interaction information (PLIP) not available DT-DG-DC-DA-DT-DG-DC-DA.4: 19 residues within 4Å: Chain B: M.4, S.5, P.9, G.10, S.12, W.13, N.14, K.15, R.16, F.23, Y.25, R.30 Ligands: DT-DG-DC-DA-DT-DG-DC-DA.3, DT-DG-DC-DA-DT-DG-DC-DA.3, DT-DG-DC-DA-DT-DG-DC-DA.3, DT-DG-DC-DA-DT-DG-DC-DA.3, DT-DG-DC-DA-DT-DG-DC-DA.3, DT-DG-DC-DA-DT-DG-DC-DA.3, DT-DG-DC-DA-DT-DG-DC-DA.3 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lindner, S.E. et al., Structural Determinants of DNA Binding by a P. falciparum ApiAP2 Transcriptional Regulator. J.Mol.Biol. (2010)

Release Date

2009-11-10

Peptides

PF14_0633 protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

PF14_0633 protein