SMTL ID : 3ihr.1

Crystal Structure of Uch37

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.95 Å

Oligo State

homo-tetramer

Ligands

8 x FMT: FORMIC ACID(Non-functional Binders)

FMT.1: 3 residues within 4Å: Chain A: A.80, Q.91, S.95 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:A.80, A:Q.91, A:S.95 FMT.2: 5 residues within 4Å: Chain A: W.36, S.37, L.38 Chain B: K.265, M.268 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.37, A:L.38 FMT.4: 3 residues within 4Å: Chain B: A.80, Q.91, S.95 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:A.80, B:Q.91, B:S.95 FMT.5: 5 residues within 4Å: Chain A: K.265, M.268 Chain B: W.36, S.37, L.38 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:S.37, B:L.38 FMT.7: 3 residues within 4Å: Chain C: A.80, Q.91, S.95 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:A.80, C:Q.91, C:S.95 FMT.8: 5 residues within 4Å: Chain C: W.36, S.37, L.38 Chain D: K.265, M.268 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:S.37, C:L.38 FMT.10: 3 residues within 4Å: Chain D: A.80, Q.91, S.95 3 PLIP interactions: 3 interactions with chain D Hydrogen bonds: D:A.80, D:Q.91, D:S.95 FMT.11: 5 residues within 4Å: Chain C: K.265, M.268 Chain D: W.36, S.37, L.38 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:S.37, D:L.38

4 x NA: SODIUM ION(Non-functional Binders)

NA.3: 2 residues within 4Å: Chain A: D.75, Q.119 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.126, A:K.126 NA.6: 2 residues within 4Å: Chain B: D.75, Q.119 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:K.126, B:K.126 NA.9: 2 residues within 4Å: Chain C: D.75, Q.119 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:K.126, C:K.126 NA.12: 2 residues within 4Å: Chain D: D.75, Q.119 2 PLIP interactions: 2 interactions with chain D Hydrogen bonds: D:Q.119, D:K.126

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Burgie, S.E. et al., Structural characterization of human Uch37. Proteins (2012)

Release Date

2009-08-11

Peptides

Ubiquitin carboxyl-terminal hydrolase isozyme L5: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

Ubiquitin carboxyl-terminal hydrolase isozyme L5