- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.05 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 4 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 5 residues within 4Å:- Chain A: G.23, D.56, S.57, E.81
- Ligands: NAD.1
5 PLIP interactions:3 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:D.56, A:S.57, A:E.81, H2O.4, H2O.7
MG.6: 5 residues within 4Å:- Chain B: G.23, D.56, S.57, E.81
- Ligands: NAD.5
5 PLIP interactions:3 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:D.56, B:S.57, B:E.81, H2O.11, H2O.11
MG.9: 5 residues within 4Å:- Chain C: G.23, D.56, S.57, E.81
- Ligands: NAD.8
5 PLIP interactions:3 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: C:D.56, C:S.57, C:E.81, H2O.14, H2O.16
MG.15: 5 residues within 4Å:- Chain D: G.23, D.56, S.57, E.81
- Ligands: NAD.14
5 PLIP interactions:3 interactions with chain D, 2 Ligand-Water interactions- Metal complexes: D:D.56, D:S.57, D:E.81, H2O.21, H2O.22
- 8 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 4 residues within 4Å:- Chain A: E.109, K.113, K.166
- Chain D: T.146
5 PLIP interactions:4 interactions with chain A, 1 interactions with chain D- Water bridges: A:K.166, A:K.166, D:A.147
- Salt bridges: A:K.113, A:K.166
SO4.4: 3 residues within 4Å:- Chain A: S.125, N.127, K.173
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:S.125, A:N.127
- Water bridges: A:K.173, A:K.173
- Salt bridges: A:K.173
SO4.7: 4 residues within 4Å:- Chain B: E.109, K.113, K.166
- Chain C: T.146
8 PLIP interactions:6 interactions with chain B, 2 interactions with chain C- Hydrogen bonds: B:E.109
- Water bridges: B:K.113, B:K.166, B:K.166, C:I.145, C:A.147
- Salt bridges: B:K.113, B:K.166
SO4.10: 4 residues within 4Å:- Chain B: T.146
- Chain C: E.109, K.113, K.166
5 PLIP interactions:5 interactions with chain C- Water bridges: C:E.109, C:K.166, C:K.166
- Salt bridges: C:K.113, C:K.166
SO4.11: 3 residues within 4Å:- Chain C: S.125, N.127, K.173
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:S.125, C:N.127
- Water bridges: C:S.125, C:D.176
- Salt bridges: C:K.173
SO4.12: 2 residues within 4Å:- Chain C: K.173, Q.174
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:Q.174
SO4.13: 7 residues within 4Å:- Chain C: G.175, V.177, R.220, S.270, S.271, S.273, S.274
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:S.273
- Water bridges: C:G.175, C:G.175
- Salt bridges: C:R.220
SO4.16: 4 residues within 4Å:- Chain A: T.146
- Chain D: E.109, K.113, K.166
5 PLIP interactions:4 interactions with chain D, 1 interactions with chain A- Water bridges: D:K.166, D:K.166, A:A.147
- Salt bridges: D:K.113, D:K.166
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Halavaty, A.S. et al., 2.05 Angstrom resolution crystal structure of a short chain dehydrogenase from Bacillus anthracis str. 'Ames Ancestor' in complex with NAD+. To be Published
- Release Date
- 2009-09-08
- Peptides
- Oxidoreductase, short chain dehydrogenase/reductase family: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.05 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 8 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Halavaty, A.S. et al., 2.05 Angstrom resolution crystal structure of a short chain dehydrogenase from Bacillus anthracis str. 'Ames Ancestor' in complex with NAD+. To be Published
- Release Date
- 2009-09-08
- Peptides
- Oxidoreductase, short chain dehydrogenase/reductase family: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D