SMTL ID : 3ikj.1

Structural characterization for the nucleotide binding ability of subunit A mutant S238A of the A1AO ATP synthase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

3 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 4 residues within 4Å: Chain A: H.245, Q.246, K.249, A.507 No protein-ligand interaction detected (PLIP) MPD.2: 7 residues within 4Å: Chain A: D.418, D.420, L.421, R.424, N.431, W.432, L.433 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:D.420, A:L.421, A:W.432, A:W.432, A:L.433 Water bridges: A:N.431 MPD.3: 6 residues within 4Å: Chain A: E.454, M.458, K.461, L.528, N.529, D.532 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.461, A:D.532

1 x TRS: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL(Non-functional Binders)

TRS.4: 0 residues within 4Å: (No contacts) 1 PLIP interactions: 1 interactions with chain A Water bridges: A:I.184

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kumar, A. et al., Nucleotide binding states of subunit A of the A-ATP synthase and the implication of P-loop switch in evolution. J.Mol.Biol. (2010)

Release Date

2010-01-12

Peptides

V-type ATP synthase alpha chain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

V-type ATP synthase alpha chain