SMTL ID : 3iop.1

PDK-1 in complex with the inhibitor Compound-8i

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x 8I1: 2-(5-{[(2R)-2-amino-3-phenylpropyl]oxy}pyridin-3-yl)-8,9-dimethoxybenzo[c][2,7]naphthyridin-4-amine(Non-covalent)

8I1.1: 21 residues within 4Å: Chain A: L.41, G.42, E.43, G.44, S.47, V.49, A.62, K.64, V.96, L.112, S.113, Y.114, A.115, K.116, G.118, E.119, E.162, N.163, L.165, T.175, D.176 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.41, A:L.41, A:V.49, A:A.62, A:Y.114, A:L.165, A:T.175 Hydrogen bonds: A:S.113, A:A.115, A:N.163, A:D.176 Water bridges: A:E.119, A:F.177

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nittoli, T. et al., The identification of 8,9-dimethoxy-5-(2-aminoalkoxy-pyridin-3-yl)-benzo[c][2,7]naphthyridin-4-ylamines as potent inhibitors of 3-phosphoinositide-dependent kinase-1 (PDK-1). Eur.J.Med.Chem. (2010)

Release Date

2010-02-16

Peptides

3-phosphoinositide-dependent protein kinase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

3-phosphoinositide-dependent protein kinase 1

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