SMTL ID : 3iqx.1

ADP complex of C.therm. Get3 in closed form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.50 Å

Oligo State

homo-dimer

Ligands

2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 20 residues within 4Å: Chain A: K.24, G.26, V.27, G.28, K.29, T.30, T.31, N.259, Q.260, P.301, L.302, L.303, E.305, E.306, V.307, F.316 Chain B: K.24, E.232, L.234 Ligands: MG.2 15 PLIP interactions: 12 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:G.26, A:G.28, A:K.29, A:T.30, A:T.31, A:T.31, A:N.259, A:Q.260, A:P.301, A:L.303, A:V.307, B:E.232 Salt bridges: A:K.29, B:K.24, B:K.24 ADP.4: 21 residues within 4Å: Chain A: K.24, E.232, L.234 Chain B: K.24, G.25, G.26, V.27, G.28, K.29, T.30, T.31, N.259, Q.260, P.301, L.302, L.303, E.305, E.306, V.307, F.316 Ligands: MG.5 17 PLIP interactions: 13 interactions with chain B, 4 interactions with chain A Hydrogen bonds: B:G.26, B:G.28, B:K.29, B:T.30, B:T.31, B:T.31, B:N.259, B:Q.260, B:P.301, B:L.303, B:V.307, B:V.307, A:E.232, A:E.232 Salt bridges: B:K.29, A:K.24, A:K.24

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 2 residues within 4Å: Chain A: T.30 Ligands: ADP.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:T.30 MG.5: 2 residues within 4Å: Chain B: T.30 Ligands: ADP.4 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:T.30

1 x ZN: ZINC ION(Non-covalent)

ZN.3: 4 residues within 4Å: Chain A: C.270, C.273 Chain B: C.270, C.273 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Metal complexes: B:C.270, B:C.273, A:C.270, A:C.273

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bozkurt, G. et al., Structural insights into tail-anchored protein binding and membrane insertion by Get3. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2009-12-15

Peptides

Tail-anchored protein targeting factor Get3: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Tail-anchored protein targeting factor Get3

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