SMTL ID : 3irs.1

CRYSTAL STRUCTURE OF UNCHARACTERIZED TIM-BARREL PROTEIN BB4693 FROM Bordetella bronchiseptica

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.76 Å

Oligo State

homo-trimer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 3 residues within 4Å: Chain A: E.198 Chain B: E.198 Chain C: E.198 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.198

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 8 residues within 4Å: Chain A: R.9, R.11, I.22, R.69, M.157, H.190, A.243, M.246 4 PLIP interactions: 4 interactions with chain A Salt bridges: A:R.9, A:R.11, A:R.69, A:H.190 SO4.3: 10 residues within 4Å: Chain B: R.9, R.11, I.22, R.69, M.157, H.190, M.215, A.243, M.246 Ligands: GOL.4 4 PLIP interactions: 4 interactions with chain B Salt bridges: B:R.9, B:R.11, B:R.69, B:H.190 SO4.5: 10 residues within 4Å: Chain C: R.9, R.11, I.22, R.69, M.157, H.190, M.215, A.243, M.246 Ligands: GOL.6 4 PLIP interactions: 4 interactions with chain C Salt bridges: C:R.9, C:R.11, C:R.69, C:H.190

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 8 residues within 4Å: Chain B: R.69, L.74, G.160, N.161, H.190, M.215, Y.216 Ligands: SO4.3 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:R.69, B:N.161, B:N.161, B:H.190, B:Y.216 GOL.6: 7 residues within 4Å: Chain C: M.157, G.160, N.161, H.190, M.215, Y.216 Ligands: SO4.5 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:N.161, C:N.161, C:Y.216, C:Y.216 Water bridges: C:N.161

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Patskovsky, Y. et al., CRYSTAL STRUCTURE OF UNCHARACTERIZED HYDROLASE FROM Bordetella bronchiseptica. To be Published

Release Date

2009-09-01

Peptides

UNCHARACTERIZED PROTEIN BB4693: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

UNCHARACTERIZED PROTEIN BB4693

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