SMTL ID : 3iu6.1

Crystal structure of the sixth bromodomain of human poly-bromodomain containing protein 1 (PB1)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.79 Å

Oligo State

monomer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: F.75, E.79, Y.123 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.79 EDO.2: 5 residues within 4Å: Chain A: V.96, Q.100, V.132, E.133, R.136 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.100, A:E.133, A:R.136 EDO.3: 5 residues within 4Å: Chain A: I.37, P.38, M.84, N.85, I.91 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.85

1 x ZN: ZINC ION(Non-covalent)

ZN.4: 2 residues within 4Å: Chain A: H.13, E.60 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.13, A:E.60, A:E.60

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Filippakopoulos, P. et al., Histone recognition and large-scale structural analysis of the human bromodomain family. Cell(Cambridge,Mass.) (2012)

Release Date

2009-09-22

Peptides

Protein polybromo-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein polybromo-1