SMTL ID : 3iw5.1

Human p38 MAP Kinase in Complex with an Indole Derivative

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

2 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 14 residues within 4Å: Chain A: E.192, L.195, W.197, H.199, Y.200, L.236, P.242, L.246, K.249, I.259, L.291, D.292, S.293, D.294 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.195, A:L.236, A:P.242, A:L.246, A:I.259 Hydrogen bonds: A:D.292, A:S.293, A:D.294 BOG.3: 2 residues within 4Å: Chain A: K.233, Y.258 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.258, A:Y.258 Hydrogen bonds: A:K.233, A:K.233

1 x DF3: N-[2-(3-{[2-(2,3-dihydro-1,4-benzodioxin-6-ylamino)-2-oxoethyl]sulfanyl}-1H-indol-1-yl)ethyl]-3-(trifluoromethyl)benzamide(Non-covalent)

DF3.2: 22 residues within 4Å: Chain A: V.30, V.38, A.51, V.52, K.53, L.75, I.84, G.85, L.86, L.104, T.106, H.107, L.108, M.109, G.110, A.111, D.112, A.157, L.167, D.168, F.169, L.171 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:V.30, A:V.38, A:A.51, A:K.53, A:I.84, A:T.106, A:L.108, A:L.171 Hydrogen bonds: A:M.109, A:G.110 Halogen bonds: A:G.85, A:D.168

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Simard, J.R. et al., High-Throughput Screening To Identify Inhibitors Which Stabilize Inactive Kinase Conformations in p38alpha. J.Am.Chem.Soc. (2009)

Release Date

2009-11-17

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14

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