SMTL ID : 3iw7.1

Human p38 MAP Kinase in Complex with an Imidazo-pyridine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

3 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.1: 14 residues within 4Å: Chain A: E.192, L.195, W.197, H.199, Y.200, N.201, P.242, L.246, K.249, I.259, L.291, D.292, S.293, D.294 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:W.197, A:P.242, A:L.246, A:I.259 Hydrogen bonds: A:N.201, A:D.292, A:S.293, A:S.293, A:D.294 Water bridges: A:H.199 BOG.3: 4 residues within 4Å: Chain A: L.195, I.229, A.255, Y.258 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.195, A:L.195, A:A.255, A:Y.258, A:Y.258 BOG.4: 10 residues within 4Å: Chain A: R.70, L.75, M.78, V.83, I.84, I.147, H.148, R.149, D.168, F.169 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.75, A:V.83, A:I.84, A:D.168 Hydrogen bonds: A:R.70, A:R.70, A:I.147, A:R.149 Salt bridges: A:R.70

1 x IPK: 2-({4-[(4-benzylpiperidin-1-yl)carbonyl]benzyl}sulfanyl)-3H-imidazo[4,5-c]pyridine(Non-covalent)

IPK.2: 14 residues within 4Å: Chain A: V.30, V.38, A.51, K.53, L.75, L.104, T.106, L.108, M.109, G.110, A.111, D.112, N.115, L.171 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.38, A:A.51, A:K.53, A:L.75, A:T.106, A:L.171, A:L.171 Hydrogen bonds: A:M.109, A:G.110

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Simard, J.R. et al., High-Throughput Screening To Identify Inhibitors Which Stabilize Inactive Kinase Conformations in p38alpha. J.Am.Chem.Soc. (2009)

Release Date

2009-11-17

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14

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