SMTL ID : 3iwn.1 (1 other biounit)

Co-crystal structure of a bacterial c-di-GMP riboswitch

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.20 Å

Oligo State

monomer

Ligands

1 x C2E: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)(Non-functional Binders)

C2E.1: 14 residues within 4Å: Chain A: G.4, C.5, A.6, A.8, G.9, G.10, G.11, C.36, A.37, A.38, A.39, G.40, C.87, C.88 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kulshina, N. et al., Recognition of the bacterial second messenger cyclic diguanylate by its cognate riboswitch. Nat.Struct.Mol.Biol. (2009)

Release Date

2009-11-10

Peptides

U1 small nuclear ribonucleoprotein A: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

B
C

U1 small nuclear ribonucleoprotein A

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