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SMTL ID : 3ix4.2
(3 other biounits)
LasR-TP1 complex
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 1.80 Å
Oligo State
homo-dimer
Ligands
2 x
TX1
:
2,4-dibromo-6-({[(2-nitrophenyl)carbonyl]amino}methyl)phenyl 2-chlorobenzoate
(Non-covalent)
TX1.1:
21 residues within 4Å:
Chain A:
L.36
,
G.38
,
L.39
,
Y.47
,
A.50
,
Y.56
,
W.60
,
Y.64
,
D.73
,
T.75
,
C.79
,
W.88
,
Y.93
,
F.101
,
A.105
,
L.110
,
T.115
,
L.125
,
G.126
,
A.127
,
S.129
15
PLIP interactions
:
15 interactions with chain A
Hydrophobic interactions:
A:T.75
,
A:W.88
,
A:F.101
,
A:F.101
,
A:A.105
,
A:L.125
,
A:A.127
Hydrogen bonds:
A:D.73
,
A:S.129
Water bridges:
A:T.75
,
A:S.129
pi-Stacking:
A:Y.47
,
A:Y.64
,
A:W.88
Halogen bonds:
A:Y.47
TX1.2:
24 residues within 4Å:
Chain B:
L.36
,
G.38
,
L.39
,
Y.47
,
A.50
,
I.52
,
Y.56
,
W.60
,
R.61
,
Y.64
,
D.73
,
T.75
,
V.76
,
C.79
,
W.88
,
Y.93
,
F.101
,
A.105
,
L.110
,
T.115
,
L.125
,
G.126
,
A.127
,
S.129
17
PLIP interactions
:
17 interactions with chain B
Hydrophobic interactions:
B:T.75
,
B:V.76
,
B:F.101
,
B:F.101
,
B:A.105
,
B:L.125
,
B:A.127
Hydrogen bonds:
B:Y.56
,
B:D.73
,
B:S.129
Water bridges:
B:T.75
,
B:S.129
pi-Stacking:
B:Y.47
,
B:Y.64
,
B:W.88
,
B:W.88
Halogen bonds:
B:Y.47
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Zou, Y. et al., Molecular basis for the recognition of structurally distinct autoinducer mimics by the Pseudomonas aeruginosa LasR quorum-sensing signaling receptor. Chem.Biol. (2009)
Release Date
2009-09-15
Peptides
Transcriptional activator protein lasR:
A
B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
B
B
E
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Transcriptional activator protein lasR
Related Entries With Identical Sequence
3ix3.1
|
3ix4.1
|
3ix4.3
|
3ix4.4
|
3ix8.1
|
3ix8.2
|
3jpu.1
|
3jpu.2
|
3jpu.3
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
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Transparent
Resolution
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High
Extreme