SMTL ID : 3ixk.2 (2 other biounits)

Potent beta-secretase 1 inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x 929: N-[(2S,3S,5R)-1-[(3,5-difluorophenyl)methoxy]-3-hydroxy-5-methyl-6-[[(2S)-3-methyl-1-oxo-1-(phenylmethylamino)butan-2-yl]amino]-6-oxo-hexan-2-yl]-5-(methyl-methylsulfonyl-amino)-N'-[(1R)-1-phenylethyl]benzene-1,3-dicarboxamide(Non-covalent)

929.1: 30 residues within 4Å: Chain A: G.31, Q.32, G.33, Y.34, L.50, D.52, G.54, S.55, V.89, P.90, Y.91, T.92, Q.93, G.94, K.127, F.128, I.130, W.135, I.138, I.146, Y.218, D.248, S.249, G.250, T.251, T.252, N.253, R.255, S.345, A.355 24 PLIP interactions: 24 interactions with chain A Hydrophobic interactions: A:Y.34, A:L.50, A:V.89, A:P.90, A:Q.93, A:I.146, A:T.251, A:A.355 Hydrogen bonds: A:D.52, A:G.54, A:P.90, A:T.92, A:Q.93, A:Q.93, A:Y.218, A:G.250, A:G.250, A:T.251, A:T.252, A:T.252, A:N.253, A:N.253, A:S.345 pi-Stacking: A:F.128

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wangsell, F. et al., Synthesis of potent BACE-1 inhibitors incorporating a hydroxyethylene isostere as central core. Eur.J.Med.Chem. (2010)

Release Date

2010-09-08

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Beta-secretase 1

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