SMTL ID : 3jbz.1

Crystal structure of mTOR docked into EM map of dimeric ATM kinase

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 17 residues within 4Å: Chain A: Q.783, K.803, E.806, Y.841, I.853, G.854, W.855, V.856, T.861, S.958, N.959, M.961, I.972, D.973 Ligands: MG.2, MG.3, MGF.4 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:Q.783, A:G.854, A:V.856 Salt bridges: A:K.803, A:K.803

2 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: S.958, N.959, D.973 Ligands: ADP.1, MGF.4 No protein-ligand interaction detected (PLIP) MG.3: 4 residues within 4Å: Chain A: D.954, D.973 Ligands: ADP.1, MGF.4 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:D.973, A:D.973

1 x MGF: TRIFLUOROMAGNESATE(Non-covalent)

MGF.4: 7 residues within 4Å: Chain A: D.954, H.956, N.959, D.973 Ligands: ADP.1, MG.2, MG.3 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lau, W.C. et al., Structure of the human dimeric ATM kinase. Cell Cycle (2016)

Release Date

2016-11-16

Peptides

Serine/threonine-protein kinase mTOR: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Serine/threonine-protein kinase mTOR