SMTL ID : 3jck.1

Structure of the yeast 26S proteasome lid sub-complex

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-1-1-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain B: N.275 Chain G: E.48, H.109, H.111, D.122 5 PLIP interactions: 4 interactions with chain G, 1 Ligand-Water interactions Metal complexes: G:H.109, G:H.111, G:D.122, G:D.122, H2O.1

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dambacher, C.M. et al., Atomic structure of the 26S proteasome lid reveals the mechanism of deubiquitinase inhibition. Elife (2016)

Release Date

2016-01-20

Peptides

26S proteasome regulatory subunit RPN3: A
26S proteasome regulatory subunit RPN5: B
26S proteasome regulatory subunit RPN6: C
26S proteasome regulatory subunit RPN7: D
26S proteasome regulatory subunit RPN8: E
26S proteasome regulatory subunit RPN9: F
Ubiquitin carboxyl-terminal hydrolase RPN11: G
26S proteasome regulatory subunit RPN12: H
26S proteasome complex subunit SEM1: I

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

26S proteasome regulatory subunit RPN3

26S proteasome regulatory subunit RPN5

26S proteasome regulatory subunit RPN6

26S proteasome regulatory subunit RPN7

26S proteasome regulatory subunit RPN8

26S proteasome regulatory subunit RPN9

Ubiquitin carboxyl-terminal hydrolase RPN11

26S proteasome regulatory subunit RPN12

26S proteasome complex subunit SEM1

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