SMTL ID : 3jql.1

Crystal Structure of the Complex Formed Between Phospholipase A2 and a Hexapeptide Fragment of Amyloid Beta Peptide, Lys-Leu-Val-Phe-Phe-Ala at 1.2 A Resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

1 x LYS- LEU- VAL- PHE- PHE- ALA: Amyloid Beta Peptide(Non-covalent)

LYS-LEU-VAL-PHE-PHE-ALA.1: 14 residues within 4Å: Chain A: L.2, F.5, I.9, W.18, F.21, A.22, Y.27, C.28, G.29, D.48, Y.63, F.64, F.100 Ligands: CA.2 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:F.5, A:I.9, A:W.18, A:Y.63, A:Y.63, A:F.100 Hydrogen bonds: A:Y.27, A:G.29 Water bridges: A:H.47, A:D.48

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: Y.27, G.29, G.31, D.48 Ligands: LYS-LEU-VAL-PHE-PHE-ALA.1 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:Y.27, A:G.29, A:G.31, A:D.48, H2O.4

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mirza, Z. et al., Crystal Structure of the Complex Formed Between Phospholipase A2 and a Hexapeptide Fragment of Amyloid Beta Peptide, Lys-Leu-Val-Phe-Phe-Ala at 1.2 A Resolution. To be Published

Release Date

2009-09-29

Peptides

Acidic phospholipase A2 3 (Fragment): A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Acidic phospholipase A2 3 (Fragment)

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