SMTL ID : 3jr7.1 (1 other biounit)

The crystal structure of the protein of DegV family COG1307 with unknown function from Ruminococcus gnavus ATCC 29149

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x PG6: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE(Non-covalent)

PG6.1: 18 residues within 4Å: Chain A: L.47, T.80, S.81, C.82, L.108, S.109, R.137, S.138, A.139, T.176, F.178, R.191, S.211, G.215, T.216, S.285, Y.288, I.295 2 PLIP interactions: 2 interactions with chain A Water bridges: A:G.110, A:R.191

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 3 residues within 4Å: Chain A: Q.130, T.159, F.160 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.130, A:F.160 Water bridges: A:E.161

3 x NA: SODIUM ION(Non-functional Binders)

NA.3: 2 residues within 4Å: Chain A: I.205, R.224 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.224, A:R.224 NA.4: 3 residues within 4Å: Chain A: A.223, R.224, K.232 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:R.224, A:K.232, A:K.232 NA.5: 2 residues within 4Å: Chain A: S.84, R.87 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.84, A:S.84, A:R.87

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, R. et al., The crystal structure of the protein of DegV family COG1307 with unknown function from Ruminococcus gnavus ATCC 29149. To be Published

Release Date

2009-10-20

Peptides

uncharacterized egV family protein COG1307: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

uncharacterized egV family protein COG1307

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