SMTL ID : 3jsk.1 (1 other biounit)

Thiazole synthase from Neurospora crassa

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

homo-octamer

Ligands

8 x AHZ: ADENOSINE DIPHOSPHATE 5-(BETA-ETHYL)-4-METHYL-THIAZOLE-2-CARBOXYLIC ACID(Non-covalent)

AHZ.1: 30 residues within 4Å: Chain A: V.85, G.86, A.87, G.88, S.89, C.90, V.110, E.111, A.112, G.113, G.118, G.119, T.182, T.183, V.184, T.246, T.247, G.248, H.249, F.253, F.256, G.300, M.301, R.311, M.312, G.313, M.319 Chain F: S.232, D.234 Ligands: FE2.2 19 PLIP interactions: 19 interactions with chain A Hydrogen bonds: A:G.86, A:S.89, A:C.90, A:A.112, A:G.113, A:G.118, A:G.119, A:V.184, A:V.184, A:G.248, A:M.301, A:M.312, A:G.313 Water bridges: A:G.91, A:T.246, A:H.249, A:E.302 Salt bridges: A:H.249, A:R.311 AHZ.3: 30 residues within 4Å: Chain B: V.85, G.86, G.88, S.89, C.90, V.110, E.111, A.112, G.113, G.118, G.119, T.182, T.183, V.184, T.246, T.247, G.248, H.249, F.253, F.256, G.300, M.301, R.311, M.312, G.313, M.319 Chain H: S.232, D.234, P.235 Ligands: FE2.4 15 PLIP interactions: 13 interactions with chain B, 2 interactions with chain H Hydrogen bonds: B:G.86, B:C.90, B:A.112, B:G.113, B:G.119, B:V.184, B:V.184, B:G.248, B:M.301, B:M.312, B:G.313, H:D.234, H:D.234 Water bridges: B:G.88 Salt bridges: B:R.311 AHZ.5: 29 residues within 4Å: Chain A: S.232, D.234 Chain C: V.85, G.86, A.87, G.88, S.89, C.90, V.110, E.111, A.112, G.113, G.118, G.119, T.182, T.183, V.184, T.246, T.247, G.248, H.249, F.253, G.300, M.301, R.311, M.312, G.313, M.319 Ligands: FE2.6 18 PLIP interactions: 18 interactions with chain C Hydrogen bonds: C:C.90, C:G.91, C:A.112, C:G.113, C:G.118, C:G.119, C:V.184, C:V.184, C:G.248, C:M.301, C:M.312, C:G.313 Water bridges: C:G.88, C:E.111, C:E.111, C:T.246, C:E.302 Salt bridges: C:R.311 AHZ.7: 28 residues within 4Å: Chain B: D.234 Chain D: V.85, G.86, G.88, S.89, C.90, V.110, E.111, A.112, G.113, G.118, G.119, T.182, T.183, V.184, T.246, T.247, G.248, H.249, F.253, F.256, G.300, M.301, R.311, M.312, G.313, M.319 Ligands: FE2.8 17 PLIP interactions: 17 interactions with chain D Hydrogen bonds: D:S.89, D:C.90, D:A.112, D:G.113, D:G.118, D:G.119, D:V.184, D:V.184, D:G.248, D:M.301, D:M.312, D:G.313 Water bridges: D:G.91, D:E.111, D:T.246, D:E.302 Salt bridges: D:R.311 AHZ.9: 30 residues within 4Å: Chain D: S.232, D.234, P.235 Chain E: V.85, G.86, G.88, S.89, C.90, V.110, E.111, A.112, G.113, G.118, G.119, T.182, T.183, V.184, T.246, T.247, G.248, H.249, F.253, F.256, G.300, M.301, R.311, M.312, G.313, M.319 Ligands: FE2.10 15 PLIP interactions: 15 interactions with chain E Hydrogen bonds: E:C.90, E:A.112, E:G.113, E:G.119, E:V.184, E:V.184, E:G.248, E:M.301, E:M.312, E:G.313 Water bridges: E:G.91, E:T.246, E:E.302 Salt bridges: E:H.249, E:R.311 AHZ.11: 31 residues within 4Å: Chain F: V.85, G.86, A.87, G.88, S.89, C.90, V.110, E.111, A.112, G.113, G.118, G.119, T.182, T.183, V.184, T.246, T.247, G.248, H.249, F.253, F.256, G.300, M.301, R.311, M.312, G.313, M.319 Chain G: S.232, D.234, P.235 Ligands: FE2.12 20 PLIP interactions: 20 interactions with chain F Hydrogen bonds: F:C.90, F:A.112, F:G.113, F:G.118, F:G.119, F:V.184, F:V.184, F:G.248, F:H.249, F:M.301, F:M.312, F:G.313 Water bridges: F:S.89, F:S.89, F:G.91, F:E.111, F:E.111, F:T.246, F:E.302 Salt bridges: F:R.311 AHZ.13: 28 residues within 4Å: Chain C: D.234 Chain G: V.85, G.86, G.88, S.89, C.90, V.110, E.111, A.112, G.113, G.118, G.119, T.182, T.183, V.184, T.246, T.247, G.248, H.249, F.253, F.256, G.300, M.301, R.311, M.312, G.313, M.319 Ligands: FE2.14 17 PLIP interactions: 17 interactions with chain G Hydrogen bonds: G:C.90, G:A.112, G:G.113, G:G.119, G:V.184, G:V.184, G:G.248, G:M.301, G:M.312, G:G.313 Water bridges: G:G.91, G:G.118, G:G.118, G:T.246, G:E.302 Salt bridges: G:H.249, G:R.311 AHZ.15: 31 residues within 4Å: Chain E: S.232, D.234, P.235 Chain H: V.85, G.86, A.87, G.88, S.89, C.90, V.110, E.111, A.112, G.113, G.118, G.119, T.182, T.183, V.184, T.246, T.247, G.248, H.249, F.253, F.256, G.300, M.301, R.311, M.312, G.313, M.319 Ligands: FE2.16 14 PLIP interactions: 14 interactions with chain H Hydrogen bonds: H:G.86, H:S.89, H:C.90, H:A.112, H:G.113, H:G.119, H:V.184, H:V.184, H:G.248, H:M.301, H:M.312, H:G.313 Water bridges: H:G.91 Salt bridges: H:R.311

8 x FE2: FE (II) ION(Non-covalent)

FE2.2: 3 residues within 4Å: Chain A: H.249 Chain F: D.234 Ligands: AHZ.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.249 FE2.4: 4 residues within 4Å: Chain B: H.249, R.311 Chain H: D.234 Ligands: AHZ.3 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:H.249 FE2.6: 4 residues within 4Å: Chain A: D.234 Chain C: H.249, R.311 Ligands: AHZ.5 1 PLIP interactions: 1 interactions with chain C Metal complexes: C:H.249 FE2.8: 4 residues within 4Å: Chain B: D.234 Chain D: H.249, R.311 Ligands: AHZ.7 1 PLIP interactions: 1 interactions with chain D Metal complexes: D:H.249 FE2.10: 4 residues within 4Å: Chain D: D.234 Chain E: H.249, R.311 Ligands: AHZ.9 1 PLIP interactions: 1 interactions with chain E Metal complexes: E:H.249 FE2.12: 3 residues within 4Å: Chain F: H.249 Chain G: D.234 Ligands: AHZ.11 1 PLIP interactions: 1 interactions with chain F Metal complexes: F:H.249 FE2.14: 4 residues within 4Å: Chain C: D.234 Chain G: H.249, R.311 Ligands: AHZ.13 1 PLIP interactions: 1 interactions with chain G Metal complexes: G:H.249 FE2.16: 3 residues within 4Å: Chain H: H.249, R.311 Ligands: AHZ.15 1 PLIP interactions: 1 interactions with chain H Metal complexes: H:H.249

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kang, Y.N. et al., Crystal structure of thiazole synthase Thi4 from Neurospora crassa. to be published

Release Date

2010-09-29

Peptides

CyPBP37 protein: ABCDEFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

CyPBP37 protein

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