- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.20 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)
HEM.1: 21 residues within 4Å:- Chain A: W.113, A.116, R.118, C.119, V.120, G.121, L.128, S.161, M.274, F.288, S.289, G.290, W.291, M.293, E.296, W.382, F.408, Y.410
- Ligands: H4B.2, JM6.3, ACT.4
20 PLIP interactions:20 interactions with chain A,- Hydrophobic interactions: A:W.113, A:W.113, A:W.113, A:A.116, A:R.118, A:L.128, A:F.288, A:F.288, A:F.288, A:F.288, A:W.291, A:E.296, A:W.382, A:W.382, A:F.408, A:F.408, A:F.408
- Hydrogen bonds: A:Y.410
- pi-Stacking: A:W.113
- Metal complexes: A:C.119
HEM.6: 20 residues within 4Å:- Chain B: W.113, A.116, R.118, C.119, V.120, G.121, S.161, M.274, F.288, S.289, G.290, W.291, M.293, E.296, W.382, F.408, Y.410
- Ligands: H4B.7, JM6.8, ACT.9
15 PLIP interactions:15 interactions with chain B,- Hydrophobic interactions: B:W.113, B:W.113, B:A.116, B:V.120, B:F.288, B:F.288, B:F.288, B:W.291, B:E.296, B:F.408, B:F.408
- Hydrogen bonds: B:R.118
- Water bridges: B:R.300
- pi-Stacking: B:W.113
- Metal complexes: B:C.119
- 2 x H4B: 5,6,7,8-TETRAHYDROBIOPTERIN(Non-covalent)
H4B.2: 11 residues within 4Å:- Chain A: S.38, M.40, R.300, V.381, W.382
- Chain B: W.380, F.395, H.396, Q.397, E.398
- Ligands: HEM.1
11 PLIP interactions:1 interactions with chain B, 10 interactions with chain A- Hydrophobic interactions: B:E.398
- Hydrogen bonds: A:R.300, A:V.381, A:W.382
- Water bridges: A:S.38, A:R.300, A:R.300, A:W.382
- pi-Stacking: A:W.382, A:W.382
- pi-Cation interactions: A:W.382
H4B.7: 11 residues within 4Å:- Chain A: W.380, F.395, H.396, Q.397, E.398
- Chain B: S.38, M.40, R.300, V.381, W.382
- Ligands: HEM.6
8 PLIP interactions:7 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:R.300, B:V.381, B:W.382
- Water bridges: B:R.300, B:R.300
- pi-Stacking: B:W.382, B:W.382
- Hydrophobic interactions: A:E.398
- 2 x JM6: N~5~-[4-(methylsulfanyl)butanimidoyl]-L-ornithine(Non-covalent)
JM6.3: 13 residues within 4Å:- Chain A: Q.182, Y.266, P.269, A.270, V.271, F.288, S.289, G.290, W.291, Y.292, E.296, D.301
- Ligands: HEM.1
7 PLIP interactions:7 interactions with chain A- Hydrophobic interactions: A:P.269
- Hydrogen bonds: A:Q.182, A:Q.182, A:Y.266, A:W.291, A:E.296
- Water bridges: A:D.301
JM6.8: 13 residues within 4Å:- Chain B: Q.182, Y.266, P.269, A.270, V.271, F.288, S.289, G.290, W.291, Y.292, E.296, D.301
- Ligands: HEM.6
12 PLIP interactions:12 interactions with chain B- Hydrophobic interactions: B:P.269, B:V.271
- Hydrogen bonds: B:Q.182, B:Q.182, B:W.291, B:Y.292, B:E.296
- Water bridges: B:R.185, B:R.185, B:D.301, B:R.307, B:R.307
- 2 x ACT: ACETATE ION(Non-functional Binders)
ACT.4: 5 residues within 4Å:- Chain A: Q.124, W.291, V.353, A.358
- Ligands: HEM.1
4 PLIP interactions:4 interactions with chain A- Hydrophobic interactions: A:Q.124, A:W.291
- Hydrogen bonds: A:W.291, A:S.361
ACT.9: 4 residues within 4Å:- Chain B: G.121, W.291, S.361
- Ligands: HEM.6
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:S.361
- 1 x ZN: ZINC ION(Non-covalent)
ZN.5: 5 residues within 4Å:- Chain A: C.30, C.35, M.36
- Chain B: C.30, C.35
4 PLIP interactions:2 interactions with chain B, 2 interactions with chain A- Metal complexes: B:C.30, B:C.35, A:C.30, A:C.35
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Martell, J.D. et al., Heme-coordinating inhibitors of neuronal nitric oxide synthase. Iron-thioether coordination is stabilized by hydrophobic contacts without increased inhibitor potency. J.Am.Chem.Soc. (2010)
- Release Date
- 2010-01-12
- Peptides
- Nitric oxide synthase, brain: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
SMTL ID : 3jt6.1
Structure of neuronal nitric oxide synthase heme domain complexed with N~5~-[4-(methylsulfanyl)butanimidoyl]-L-ornithine
Nitric oxide synthase, brain
Related Entries With Identical Sequence
1om4.1 | 2hx3.1 | 2hx4.1 | 3b3m.1 | 3b3n.1 | 3b3o.1 | 3b3p.1 | 3hsn.1 | 3hso.1 | 3hsp.1 | 3jt3.1 | 3jt4.1 | 3jt5.1 | 3jt7.1 | 3jt8.1 | 3jt9.1 | 3jta.1 | 3n2r.1 | 3n5v.1 | 3n5w.1 | 3n5x.1 | 3n5y.1 | 3n5z.1 | 3n60.1 | 3nlm.1 | 3nlv.1 | 3nlw.1 | 3nlx.1 | 3nly.1 | 3nlz.1 more...less...3nm0.1 | 3nny.1 | 3nnz.1 | 3pne.1 | 3pnf.1 | 3png.1 | 3q99.1 | 3q9a.1 | 3rqj.1 | 3rqk.1 | 3rql.1 | 3rqm.1 | 3rqn.1 | 3svp.1 | 3svq.1 | 3tyl.1 | 3tym.1 | 3tyn.1 | 3tyo.1 | 3ufo.1 | 3ufp.1 | 3ufq.1 | 3ufr.1 | 3ufs.1 | 3uft.1 | 3ufu.1 | 3ufv.1 | 3ufw.1 | 4c39.1 | 4cam.1 | 4can.1 | 4cao.1 | 4cap.1 | 4caq.1 | 4cdt.1 | 4ctp.1 | 4ctq.1 | 4ctr.1 | 4ctt.1 | 4ctu.1 | 4ctv.1 | 4ctw.1 | 4ctx.1 | 4d2y.1 | 4d2z.1 | 4d30.1 | 4d31.1 | 4d32.1 | 4d3b.1 | 4d7o.1 | 4eux.1 | 4eux.2 | 4fvw.1 | 4fvx.1 | 4fvy.1 | 4fvz.1 | 4fw0.1 | 4gqe.1 | 4ims.1 | 4imt.1 | 4imu.1 | 4imw.1 | 4jse.1 | 4jsf.1 | 4jsh.1 | 4jsi.1 | 4jsj.1 | 4k5d.1 | 4k5f.1 | 4k5g.1 | 4kch.1 | 4kci.1 | 4kcj.1 | 4kck.1 | 4kcl.1 | 4kcm.1 | 4kcn.1 | 4kco.1 | 4lux.1 | 4ugz.1 | 4uh0.1 | 4uh1.1 | 4uh2.1 | 4uh3.1 | 4uh4.1 | 4upm.1 | 4upn.1 | 4upo.1 | 4upp.1 | 4v3v.1 | 4v3w.1 | 4v3x.1 | 4v3y.1 | 4v3z.1 | 5ad4.1 | 5ad5.1 | 5ad6.1 | 5ad7.1 | 5ad8.1 | 5ad9.1 | 5ada.1 | 5adb.1 | 5adc.1 | 5agk.1 | 5agl.1 | 5agm.1 | 5agn.1 | 5ago.1 | 5agp.1 | 5fvo.1 | 5fvp.1 | 5fvq.1 | 5fvr.1 | 5fvs.1 | 5fvt.1 | 5fw0.1 | 5unr.1 | 5uns.1 | 5unt.1 | 5unu.1 | 5unv.1 | 5unw.1 | 5unx.1 | 5uny.1 | 5unz.1 | 5uo0.1 | 5vui.1 | 5vuj.1 | 5vuk.1 | 5vul.1 | 5vum.1 | 5vun.1 | 5vuo.1 | 5vup.1 | 5vuq.1 | 5vur.1 | 5vus.1 | 5vut.1 | 5vuu.1 | 6auq.1 | 6aur.1 | 6aus.1 | 6aut.1 | 6auu.1 | 6auv.1 | 6auw.1 | 6aux.1 | 6ngj.1 | 6ngk.1 | 6ngl.1 | 6ngm.1 | 6ngn.1 | 6ngp.1 | 6ngq.1 | 6ngr.1 | 6ngs.1 | 6ngt.1 | 6ngu.1 | 6ngv.1 | 6ngw.1 | 6ngx.1 | 6ngy.1 | 6ngz.1 | 6nh0.1 | 6nhd.1 | 6nhe.1 | 6pmv.1 | 6pmw.1 | 6pmx.1 | 6pmy.1 | 6pmz.1 | 6pn0.1 | 6pn1.1 | 6pn2.1 | 6pn3.1 | 6pn4.1 | 6pn5.1 | 6pn6.1 | 6pn7.1 | 6pn8.1 | 6pn9.1 | 7s3x.1 | 7s3y.1 | 7s3z.1 | 7s40.1 | 7tsf.1 | 8fg9.1 | 8fga.1 | 8fgb.1 | 8fgc.1