- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.82 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 8 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 2 residues within 4Å:- Chain A: R.80, K.187
1 PLIP interactions:1 interactions with chain A- Salt bridges: A:R.80
SO4.3: 4 residues within 4Å:- Chain A: S.105, N.108, I.112, S.443
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:S.105, A:N.108, A:S.443
- Water bridges: A:S.105
SO4.5: 3 residues within 4Å:- Chain A: D.393, F.394, R.419
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:F.394
- Salt bridges: A:R.419
SO4.6: 4 residues within 4Å:- Chain A: D.415, S.416, R.417, E.418
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:S.416, A:R.417, A:E.418
SO4.7: 2 residues within 4Å:- Chain A: P.56, R.60
3 PLIP interactions:3 interactions with chain A- Water bridges: A:A.57, A:A.57
- Salt bridges: A:R.60
SO4.16: 3 residues within 4Å:- Chain B: R.80, K.187
- Ligands: MG.22
4 PLIP interactions:4 interactions with chain B- Water bridges: B:R.80, B:Q.191
- Salt bridges: B:R.80, B:K.187
SO4.17: 4 residues within 4Å:- Chain B: S.105, N.108, I.112, S.443
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:S.105, B:N.108
- Water bridges: B:S.105, B:S.443, B:S.443, B:S.443
SO4.18: 3 residues within 4Å:- Chain B: P.56, A.57, R.60
3 PLIP interactions:3 interactions with chain B- Water bridges: B:A.57, B:A.57
- Salt bridges: B:R.60
- 1 x SIN: SUCCINIC ACID(Non-covalent)
SIN.4: 11 residues within 4Å:- Chain A: N.150, F.151, L.155, R.281, C.282, T.283, T.439, G.440, A.441, F.447
- Ligands: NAD.1
9 PLIP interactions:9 interactions with chain A- Hydrophobic interactions: A:F.151, A:R.281, A:T.283
- Hydrogen bonds: A:N.150, A:C.282, A:T.283, A:G.440, A:A.441
- Salt bridges: A:R.281
- 8 x GOL: GLYCEROL(Non-functional Binders)
GOL.8: 5 residues within 4Å:- Chain A: D.264, V.267, Y.268, V.306
- Chain B: L.485
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:D.264, A:Y.268
GOL.9: 5 residues within 4Å:- Chain A: L.63, F.117, R.118, G.122, E.123
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:E.123, A:E.123
- Water bridges: A:G.122
GOL.10: 2 residues within 4Å:- Chain A: T.309, L.310
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:T.309
GOL.11: 4 residues within 4Å:- Chain A: Q.292, G.293, D.297, R.390
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:G.293, A:D.297, A:R.390, A:R.390
- Water bridges: A:D.369, A:S.371, A:S.371
GOL.12: 4 residues within 4Å:- Chain A: D.378, A.403, T.404, Q.405
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:Q.405
- Water bridges: A:R.376, A:A.403, A:T.404, A:T.404
GOL.13: 6 residues within 4Å:- Chain A: H.234, N.455, R.457
- Chain B: H.234, N.455, R.457
7 PLIP interactions:4 interactions with chain A, 3 interactions with chain B- Hydrogen bonds: A:H.234, A:N.455, A:R.457, A:R.457, B:H.234, B:N.455, B:R.457
GOL.14: 3 residues within 4Å:- Chain A: L.485
- Chain B: D.264, Y.268
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:D.264, B:Y.268
GOL.21: 5 residues within 4Å:- Chain B: L.63, F.117, R.118, G.122, E.123
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:E.123, B:E.123
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 1 x MG: MAGNESIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, Y. et al., Crystal Structure of Succinylglutamic Semialdehyde Dehydrogenase from Pseudomonas aeruginosa. To be Published
- Release Date
- 2009-09-22
- Peptides
- Succinylglutamic semialdehyde dehydrogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.82 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)
- 8 x SO4: SULFATE ION(Non-functional Binders)
- 1 x SIN: SUCCINIC ACID(Non-covalent)
- 8 x GOL: GLYCEROL(Non-functional Binders)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 1 x MG: MAGNESIUM ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, Y. et al., Crystal Structure of Succinylglutamic Semialdehyde Dehydrogenase from Pseudomonas aeruginosa. To be Published
- Release Date
- 2009-09-22
- Peptides
- Succinylglutamic semialdehyde dehydrogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B