SMTL ID : 3jv6.3 (2 other biounits)

Crystal structure of the dimerization domains p52 and RelB

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.78 Å

Oligo State

hetero-1-1-mer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: K.31, R.56, Q.57 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:R.56, A:Q.57 Water bridges: A:K.31, A:K.31 Salt bridges: A:K.31, A:R.56 SO4.2: 3 residues within 4Å: Chain B: D.20, E.21, R.66 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:E.21, B:E.21, B:E.21 Salt bridges: B:K.11, B:R.66 SO4.3: 3 residues within 4Å: Chain B: K.31, K.59, Q.60 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:K.59, B:Q.60 Salt bridges: B:K.31, B:K.59

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vu, D. et al., A structural basis for selective dimerization by NF-kappa B RelB. J.Mol.Biol. (2013)

Release Date

2010-11-24

Peptides

Transcription factor RelB: A
Nuclear factor NF-kappa-B p100 subunit: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

Transcription factor RelB

Nuclear factor NF-kappa-B p100 subunit

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