SMTL ID : 3jxt.2 (1 other biounit)

Crystal structure of the third PDZ domain of SAP-102 in complex with a fluorogenic peptide-based ligand

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x ACE- 4DB- ARG- THR- THR- PRO- VAL: Voltage-dependent calcium channel gamma-2 subunit(Non-covalent)

ACE-4DB-ARG-THR-THR-PRO-VAL.1: 15 residues within 4Å: Chain A: G.24, L.25, G.26, F.27, N.28, I.29, V.30, E.33, S.41, H.74, E.75, L.81, K.82, R.101, F.102 21 PLIP interactions: 21 interactions with chain A Hydrophobic interactions: A:F.27, A:V.30, A:E.33, A:E.33, A:L.81 Hydrogen bonds: A:L.25, A:G.26, A:F.27, A:F.27, A:N.28, A:I.29, A:I.29, A:S.41, A:H.74 Water bridges: A:E.33, A:E.33, A:H.74, A:E.75, A:E.75 Salt bridges: A:E.33, A:E.75

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sainlos, M. et al., Caged mono- and divalent ligands for light-assisted disruption of PDZ domain-mediated interactions. J.Am.Chem.Soc. (2013)

Release Date

2010-09-29

Peptides

Disks large homolog 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Disks large homolog 3

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