SMTL ID : 3k22.2 (1 other biounit)

Glucocorticoid Receptor with Bound alaninamide 10 with TIF2 peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

hetero-1-1-mer

Ligands

1 x JZS: N-[(1R)-2-amino-1-methyl-2-oxoethyl]-3-(6-methyl-4-{[3,3,3-trifluoro-2-hydroxy-2-(trifluoromethyl)propyl]amino}-1H-indazol-1-yl)benzamide(Non-covalent)

JZS.1: 23 residues within 4Å: Chain A: E.22, P.23, L.45, N.46, L.48, G.49, Q.52, A.55, A.56, W.82, M.83, L.85, M.86, A.87, A.89, L.90, R.93, F.105, M.128, Y.217, C.218, F.231, L.235 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:P.23, A:Q.52, A:M.86, A:A.89 Hydrogen bonds: A:L.45, A:L.45, A:Q.52, A:Q.52, A:Q.52 pi-Stacking: A:F.105, A:F.105

2 x JZR: hexyl beta-D-glucopyranoside(Non-covalent)

JZR.2: 10 residues within 4Å: Chain A: T.38, M.42, L.45, P.119, G.120, Q.124, M.128, Y.217, T.221, M.227 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:T.38, A:L.45, A:Q.124, A:Q.124 Hydrogen bonds: A:Y.217, A:Y.217 JZR.3: 4 residues within 4Å: Chain A: E.166, E.170, M.173, K.177 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Biggadike, K. et al., Design and x-ray crystal structures of high-potency nonsteroidal glucocorticoid agonists exploiting a novel binding site on the receptor. Proc.Natl.Acad.Sci.USA (2009)

Release Date

2010-08-11

Peptides

Glucocorticoid receptor: A
Transcriptional Intermediary Factor 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Glucocorticoid receptor

Transcriptional Intermediary Factor 2

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