SMTL ID : 3k24.2 (1 other biounit)

Crystal structure of mature apo-Cathepsin L C25A mutant in complex with Gln-Leu-Ala peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x GLN- LEU- ALA: H3 peptide(Non-covalent)

GLN-LEU-ALA.1: 13 residues within 4Å: Chain A: G.23, S.24, A.25, W.26, G.61, E.63, G.67, G.68, M.70, A.135, D.162, H.163, G.164 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:A.25, A:G.68, A:G.68, A:D.162, A:H.163

1 x NAG- NDG- MAN- BMA- NDG- MAN: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-6)-beta-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-2)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NDG-MAN-BMA-NDG-MAN.2: 5 residues within 4Å: Chain A: G.81, S.105, V.106, A.107, N.108 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Adams-Cioaba, M.A. et al., Structural basis for the recognition and cleavage of histone H3 by cathepsin L. Nat Commun (2011)

Release Date

2010-03-23

Peptides

Cathepsin L1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Cathepsin L1

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