SMTL ID : 3k33.1

Crystal structure of the Phd-Doc complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

hetero-2-6-mer

Ligands

4 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 4 residues within 4Å: Chain A: R.2 Chain C: A.51, E.55 Chain D: Y.47 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain C Water bridges: A:R.2 Salt bridges: A:R.2 Hydrophobic interactions: C:A.51, C:E.55 Hydrogen bonds: C:E.55 ACT.2: 3 residues within 4Å: Chain D: T.8, N.12, E.15 2 PLIP interactions: 2 interactions with chain D Hydrophobic interactions: D:T.8, D:N.12 ACT.3: 4 residues within 4Å: Chain E: R.2 Chain G: A.51, E.55 Chain H: Y.47 5 PLIP interactions: 3 interactions with chain G, 2 interactions with chain E Hydrophobic interactions: G:A.51, G:E.55 Hydrogen bonds: G:E.55 Water bridges: E:R.2 Salt bridges: E:R.2 ACT.4: 3 residues within 4Å: Chain H: T.8, N.12, E.15 2 PLIP interactions: 2 interactions with chain H Hydrophobic interactions: H:T.8, H:N.12

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Garcia-Pino, A. et al., Allostery and intrinsic disorder mediate transcription regulation by conditional cooperativity. Cell(Cambridge,Mass.) (2010)

Release Date

2010-08-18

Peptides

Death on curing protein: AE
Prevent host death protein: BCDFGH

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E
A

B
B

C
C

D
D

F
B

G
C

H
D

Death on curing protein

Prevent host death protein

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