- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.59 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 4 x CA: CALCIUM ION(Non-covalent)
CA.2: 5 residues within 4Å:- Chain A: D.224, T.228, D.255, G.275, G.277
5 PLIP interactions:5 interactions with chain A- Metal complexes: A:D.224, A:T.228, A:D.255, A:G.275, A:G.277
CA.5: 5 residues within 4Å:- Chain B: D.224, T.228, D.255, G.275, G.277
5 PLIP interactions:5 interactions with chain B- Metal complexes: B:D.224, B:T.228, B:D.255, B:G.275, B:G.277
CA.8: 5 residues within 4Å:- Chain C: D.224, T.228, D.255, G.275, G.277
5 PLIP interactions:5 interactions with chain C- Metal complexes: C:D.224, C:T.228, C:D.255, C:G.275, C:G.277
CA.12: 6 residues within 4Å:- Chain D: D.224, T.228, D.255, G.275, G.277, G.278
5 PLIP interactions:5 interactions with chain D- Metal complexes: D:D.224, D:T.228, D:D.255, D:G.275, D:G.277
- 4 x G39: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid(Non-covalent)
G39.3: 13 residues within 4Å:- Chain A: R.47, E.48, D.80, R.81, W.108, I.152, R.154, A.176, E.206, R.223, N.225, R.305, Y.340
13 PLIP interactions:13 interactions with chain A- Hydrophobic interactions: A:W.108, A:I.152, A:R.154, A:A.176
- Hydrogen bonds: A:E.48, A:R.81
- Water bridges: A:E.48, A:W.108, A:Y.340, A:Y.340
- Salt bridges: A:R.47, A:R.223, A:R.305
G39.6: 13 residues within 4Å:- Chain B: R.47, E.48, D.80, R.81, I.152, R.154, A.176, E.206, E.207, R.223, N.225, R.305, Y.340
14 PLIP interactions:14 interactions with chain B- Hydrophobic interactions: B:I.152, B:I.152, B:R.154, B:A.176
- Hydrogen bonds: B:E.48, B:R.81, B:Y.340
- Water bridges: B:E.48, B:W.108, B:E.157, B:Y.340
- Salt bridges: B:R.47, B:R.223, B:R.305
G39.9: 12 residues within 4Å:- Chain C: R.47, E.48, D.80, R.81, I.152, R.154, A.176, E.206, R.223, N.225, R.305, Y.340
12 PLIP interactions:12 interactions with chain C- Hydrophobic interactions: C:I.152, C:R.154
- Hydrogen bonds: C:E.48, C:D.80, C:R.81, C:Y.340
- Water bridges: C:W.108, C:E.157, C:Y.340
- Salt bridges: C:R.47, C:R.223, C:R.305
G39.13: 13 residues within 4Å:- Chain D: R.47, E.48, D.80, R.81, W.108, I.152, R.154, A.176, E.206, R.223, N.225, R.305, Y.340
12 PLIP interactions:12 interactions with chain D- Hydrophobic interactions: D:W.108, D:I.152, D:R.154
- Hydrogen bonds: D:E.48, D:R.81
- Water bridges: D:E.48, D:W.108, D:E.157, D:Y.340
- Salt bridges: D:R.47, D:R.223, D:R.305
- 1 x YT3: YTTRIUM (III) ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Oakley, A.J. et al., Structural and Functional Basis of Resistance to Neuraminidase Inhibitors of Influenza B Viruses. J.Med.Chem. (2010)
- Release Date
- 2010-09-01
- Peptides
- Neuraminidase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
MB
NC
OD
P
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.59 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
- 4 x CA: CALCIUM ION(Non-covalent)
- 4 x G39: (3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid(Non-covalent)
- 1 x YT3: YTTRIUM (III) ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Oakley, A.J. et al., Structural and Functional Basis of Resistance to Neuraminidase Inhibitors of Influenza B Viruses. J.Med.Chem. (2010)
- Release Date
- 2010-09-01
- Peptides
- Neuraminidase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
MB
NC
OD
P