SMTL ID : 3k3f.1

Crystal Structure of the Urea Transporter from Desulfovibrio Vulgaris

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-trimer

Ligands

27 x AU: GOLD ION(Non-covalent)(Covalent)

AU.1: 2 residues within 4Å: Chain A: Q.27, A.325 Ligand excluded by PLIP AU.2: 5 residues within 4Å: Chain A: C.22, T.34, L.38 Ligands: AU.3, AU.8 Ligand excluded by PLIP AU.3: 5 residues within 4Å: Chain A: C.18, C.22 Ligands: AU.2, AU.8, AU.9 Ligand excluded by PLIP AU.4: 5 residues within 4Å: Chain A: T.50, V.53, C.54, L.103 Ligands: AU.6 Ligand excluded by PLIP AU.5: 2 residues within 4Å: Chain A: C.227 Ligands: AU.7 Ligand excluded by PLIP AU.6: 6 residues within 4Å: Chain A: T.50, C.54, P.93, M.102, L.103 Ligands: AU.4 Ligand excluded by PLIP AU.7: 2 residues within 4Å: Chain A: C.227 Ligands: AU.5 Ligand excluded by PLIP AU.8: 5 residues within 4Å: Chain A: C.18, D.19 Ligands: AU.2, AU.3, AU.9 Ligand excluded by PLIP AU.9: 3 residues within 4Å: Chain A: C.18 Ligands: AU.3, AU.8 Ligand excluded by PLIP AU.10: 2 residues within 4Å: Chain B: Q.27, A.325 Ligand excluded by PLIP AU.11: 5 residues within 4Å: Chain B: C.22, T.34, L.38 Ligands: AU.12, AU.17 Ligand excluded by PLIP AU.12: 5 residues within 4Å: Chain B: C.18, C.22 Ligands: AU.11, AU.17, AU.18 Ligand excluded by PLIP AU.13: 5 residues within 4Å: Chain B: T.50, V.53, C.54, L.103 Ligands: AU.15 Ligand excluded by PLIP AU.14: 2 residues within 4Å: Chain B: C.227 Ligands: AU.16 Ligand excluded by PLIP AU.15: 6 residues within 4Å: Chain B: T.50, C.54, P.93, M.102, L.103 Ligands: AU.13 Ligand excluded by PLIP AU.16: 2 residues within 4Å: Chain B: C.227 Ligands: AU.14 Ligand excluded by PLIP AU.17: 5 residues within 4Å: Chain B: C.18, D.19 Ligands: AU.11, AU.12, AU.18 Ligand excluded by PLIP AU.18: 3 residues within 4Å: Chain B: C.18 Ligands: AU.12, AU.17 Ligand excluded by PLIP AU.19: 2 residues within 4Å: Chain C: Q.27, A.325 Ligand excluded by PLIP AU.20: 5 residues within 4Å: Chain C: C.22, T.34, L.38 Ligands: AU.21, AU.26 Ligand excluded by PLIP AU.21: 5 residues within 4Å: Chain C: C.18, C.22 Ligands: AU.20, AU.26, AU.27 Ligand excluded by PLIP AU.22: 5 residues within 4Å: Chain C: T.50, V.53, C.54, L.103 Ligands: AU.24 Ligand excluded by PLIP AU.23: 2 residues within 4Å: Chain C: C.227 Ligands: AU.25 Ligand excluded by PLIP AU.24: 6 residues within 4Å: Chain C: T.50, C.54, P.93, M.102, L.103 Ligands: AU.22 Ligand excluded by PLIP AU.25: 2 residues within 4Å: Chain C: C.227 Ligands: AU.23 Ligand excluded by PLIP AU.26: 5 residues within 4Å: Chain C: C.18, D.19 Ligands: AU.20, AU.21, AU.27 Ligand excluded by PLIP AU.27: 3 residues within 4Å: Chain C: C.18 Ligands: AU.21, AU.26 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Levin, E.J. et al., Crystal structure of a bacterial homologue of the kidney urea transporter. Nature (2009)

Release Date

2009-11-17

Peptides

Urea transporter: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Membrane

We predict this structure to be a membrane protein.
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Urea transporter

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