SMTL ID : 3k3i.1

p38alpha bound to novel DGF-out compound PF-00215955

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x JZJ: (3S)-3-[4-(4-bromophenyl)-1H-imidazol-2-yl]-1,2,3,4-tetrahydroisoquinoline(Non-covalent)

JZJ.1: 13 residues within 4Å: Chain A: A.49, K.51, E.69, L.72, L.73, I.82, L.102, T.104, I.139, H.146, L.165, D.166, F.167 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:A.49, A:K.51, A:K.51, A:L.72, A:L.73, A:I.82, A:I.82, A:L.102, A:T.104, A:D.166 Hydrogen bonds: A:K.51, A:E.69, A:D.166 Water bridges: A:K.51

2 x I46: 2-fluoro-4-[4-(4-fluorophenyl)-1H-pyrazol-3-yl]pyridine(Non-covalent)

I46.2: 13 residues within 4Å: Chain A: P.189, E.190, L.193, W.195, L.230, P.240, L.244, K.247, I.248, I.257, L.289, D.290, S.291 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:P.189, A:E.190, A:L.193, A:W.195, A:L.230, A:P.240, A:L.244, A:L.244, A:I.248, A:L.289 Hydrogen bonds: A:S.291, A:S.291 Water bridges: A:D.292 pi-Stacking: A:W.195, A:W.195 I46.3: 4 residues within 4Å: Chain A: E.20, R.21, Q.23, T.42 1 PLIP interactions: 1 interactions with chain A Water bridges: A:E.20

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tecle, H. et al., The design, synthesis and potential utility of fluorescence probes that target DFG-out conformation of p38alpha for high throughput screening binding assay. Chem.Biol.Drug Des. (2009)

Release Date

2009-11-17

Peptides

Mitogen-activated protein kinase 14: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase 14