SMTL ID : 3k7g.1

Crystal structure of the Indian Hedgehog N-terminal signalling domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.130, D.137, E.166, H.172 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.130, A:D.137, A:D.137, A:H.172, H2O.3

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: Q.36, S.38, R.153 7 PLIP interactions: 7 interactions with chain A Hydrogen bonds: A:Q.36, A:S.38 Water bridges: A:N.40, A:R.153, A:R.153, A:R.153 Salt bridges: A:R.153 SO4.3: 4 residues within 4Å: Chain A: Y.52, G.54, K.55, E.126 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Y.52, A:K.55 Water bridges: A:K.55, A:E.126 SO4.4: 1 residues within 4Å: Chain A: R.51 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:R.51 SO4.5: 4 residues within 4Å: Chain A: I.74, I.75, F.76, R.86 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:I.74, A:F.76 Water bridges: A:R.86, A:R.86, A:R.86, A:R.86, A:R.86 Salt bridges: A:R.86

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.6: 3 residues within 4Å: Chain A: S.60, E.61, R.62 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.61, A:R.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

He, Y.-X. et al., Crystal structure of the Indian Hedgehog N-terminal signalling domain. To be Published

Release Date

2011-01-26

Peptides

Indian hedgehog protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Indian hedgehog protein