SMTL ID : 3k83.1

Crystal Structure Analysis of a Biphenyl/Oxazole/Carboxypyridine alpha-ketoheterocycle Inhibitor Bound to a Humanized Variant of Fatty Acid Amide Hydrolase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.25 Å

Oligo State

homo-dimer

Ligands

2 x F27: 6-[2-(3-biphenyl-4-ylpropanoyl)-1,3-oxazol-5-yl]pyridine-2-carboxylic acid(Covalent)

F27.1: 20 residues within 4Å: Chain A: K.136, M.185, F.186, S.187, Y.188, S.211, T.230, D.231, I.232, G.233, G.234, S.235, G.262, C.263, V.264, L.272, F.375, F.426, T.482, V.485 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:F.186, A:F.186, A:I.232, A:F.375, A:F.426, A:T.482, A:V.485 Hydrogen bonds: A:K.136, A:S.211, A:I.232, A:G.233, A:G.234, A:S.235, A:S.235, A:C.263, A:V.264, A:V.264 F27.3: 20 residues within 4Å: Chain B: K.136, M.185, F.186, S.187, Y.188, S.211, T.230, D.231, I.232, G.233, G.234, S.235, G.262, C.263, V.264, L.272, F.375, F.426, T.482, V.485 17 PLIP interactions: 17 interactions with chain B Hydrophobic interactions: B:F.186, B:I.232, B:F.375, B:F.426, B:T.482, B:V.485 Hydrogen bonds: B:K.136, B:S.211, B:T.230, B:I.232, B:G.233, B:G.234, B:S.235, B:S.235, B:C.263, B:V.264 pi-Stacking: B:F.186

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: N.253, W.550 Chain B: N.253, W.550 Ligand excluded by PLIP

1 x 1DO: 1-DODECANOL(Non-covalent)

1DO.4: 8 residues within 4Å: Chain B: S.140, M.156, P.157, S.158, E.159, G.259, L.260, K.261 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:E.159, B:K.261 Hydrogen bonds: B:L.260

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mileni, M. et al., X-ray crystallographic analysis of alpha-ketoheterocycle inhibitors bound to a humanized variant of fatty acid amide hydrolase. J.Med.Chem. (2010)

Release Date

2009-12-01

Peptides

Fatty-acid amide hydrolase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Fatty-acid amide hydrolase 1

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