SMTL ID : 3k8g.1 (1 other biounit)

Structure of crystal form I of TP0453

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.95 Å

Oligo State

monomer

Ligands

3 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 8 residues within 4Å: Chain A: I.37, I.38, H.41, I.47, F.68, V.120, F.122 Ligands: MPD.2 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:H.41, A:F.68, A:V.120, A:F.122, A:F.122 MPD.2: 12 residues within 4Å: Chain A: I.47, I.50, V.51, T.54, V.57, L.70, F.71, G.72, Y.76, S.118, V.120 Ligands: MPD.1 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.47, A:V.57 Hydrogen bonds: A:T.54, A:S.118 MPD.3: 6 residues within 4Å: Chain A: R.148, T.161, Y.192, L.193, T.194, T.203 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.148, A:R.148

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Luthra, A. et al., The Transition from Closed to Open Conformation of Treponema pallidum Outer Membrane-associated Lipoprotein TP0453 Involves Membrane Sensing and Integration by Two Amphipathic Helices. J.Biol.Chem. (2011)

Release Date

2010-10-27

Peptides

30kLP: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

30kLP

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