SMTL ID : 3kan.1 (2 other biounits)

D-dopachrome tautomerase (D-DT)/macrophage migration inhibitory factor 2 (MIF2) complexed with inhibitor 4-IPP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.13 Å

Oligo State

homo-trimer

Ligands

3 x RW1: 4-phenylpyrimidine(Covalent)

RW1.1: 7 residues within 4Å: Chain A: P.1, F.2, R.36, N.38, K.109, M.114 Ligands: CL.2 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:R.36, A:R.36 Hydrogen bonds: A:N.38 RW1.3: 7 residues within 4Å: Chain B: P.1, F.2, R.36, N.38, K.109, M.114 Ligands: CL.4 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:R.36, B:R.36 Hydrogen bonds: B:N.38 RW1.5: 7 residues within 4Å: Chain C: P.1, F.2, R.36, N.38, K.109, M.114 Ligands: CL.6 3 PLIP interactions: 3 interactions with chain C Hydrophobic interactions: C:R.36, C:R.36 Hydrogen bonds: C:N.38

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 5 residues within 4Å: Chain A: P.1, K.32, S.63, I.64 Ligands: RW1.1 Ligand excluded by PLIP CL.4: 5 residues within 4Å: Chain B: P.1, K.32, S.63, I.64 Ligands: RW1.3 Ligand excluded by PLIP CL.6: 5 residues within 4Å: Chain C: P.1, K.32, S.63, I.64 Ligands: RW1.5 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rajasekaran, D. et al., Targeting distinct tautomerase sites of D-DT and MIF with a single molecule for inhibition of neutrophil lung recruitment. Faseb J. (2014)

Release Date

2011-04-20

Peptides

D-dopachrome tautomerase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D-dopachrome tautomerase

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