SMTL ID : 3ken.1

Human Eg5 in complex with S-trityl-L-cysteine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.1: 13 residues within 4Å: Chain A: R.24, R.26, P.27, Q.106, T.107, G.108, T.109, G.110, K.111, T.112, F.113, E.118 Ligands: MG.4 14 PLIP interactions: 14 interactions with chain A Hydrogen bonds: A:R.24, A:G.108, A:T.109, A:G.110, A:K.111, A:T.112, A:T.112, A:F.113 Water bridges: A:R.24, A:T.107, A:K.111 Salt bridges: A:K.111 pi-Stacking: A:F.113, A:F.113

1 x ZZD: S-TRITYL-L-CYSTEINE(Non-covalent)

ZZD.2: 12 residues within 4Å: Chain A: T.112, E.116, G.117, E.118, R.119, A.133, P.137, Y.211, L.214, E.215, A.218, R.221 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:E.116, A:R.119, A:R.119, A:A.133, A:P.137, A:Y.211, A:L.214, A:L.214, A:L.214, A:E.215 Hydrogen bonds: A:E.116, A:E.116, A:G.117 Salt bridges: A:R.221

1 x KEN: N,N-dimethylmethanamine(Non-covalent)

KEN.3: 1 residues within 4Å: Chain A: L.341 No protein-ligand interaction detected (PLIP)

1 x MG: MAGNESIUM ION(Non-covalent)

MG.4: 2 residues within 4Å: Chain A: T.112 Ligands: ADP.1 5 PLIP interactions: 1 interactions with chain A, 4 Ligand-Water interactions Metal complexes: A:T.112, H2O.1, H2O.1, H2O.1, H2O.3

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, E.D. et al., Allosteric drug discrimination is coupled to mechanochemical changes in the kinesin-5 motor core. J.Biol.Chem. (2010)

Release Date

2010-03-16

Peptides

Kinesin-like protein KIF11: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Kinesin-like protein KIF11

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