SMTL ID : 3kes.2 (1 other biounit)

Crystal structure of the autoproteolytic domain from the nuclear pore complex component NUP145 from Saccharomyces cerevisiae in the Hexagonal, P61 space group

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

monomer

Ligands

16 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: Q.135, D.138, Y.149, Y.152, P.154 Ligand excluded by PLIP EDO.2: 4 residues within 4Å: Chain A: W.23, C.24, S.27, P.28 Ligand excluded by PLIP EDO.3: 5 residues within 4Å: Chain A: Q.58, H.59, P.106, K.162, N.164 Ligand excluded by PLIP EDO.4: 4 residues within 4Å: Chain A: A.41, V.42, S.43, D.60 Ligand excluded by PLIP EDO.5: 4 residues within 4Å: Chain A: R.49, R.50, G.51, E.112 Ligand excluded by PLIP EDO.6: 9 residues within 4Å: Chain A: D.62, L.63, T.64, A.65, F.66, Y.90, P.97, G.102 Ligands: EDO.16 Ligand excluded by PLIP EDO.7: 6 residues within 4Å: Chain A: E.32, T.67, K.68, S.69, F.70 Ligands: EDO.8 Ligand excluded by PLIP EDO.8: 7 residues within 4Å: Chain A: P.28, E.29, E.32, S.69, F.70, R.71 Ligands: EDO.7 Ligand excluded by PLIP EDO.9: 1 residues within 4Å: Chain A: H.101 Ligand excluded by PLIP EDO.10: 4 residues within 4Å: Chain A: P.116, E.133, V.136, F.137 Ligand excluded by PLIP EDO.11: 2 residues within 4Å: Chain A: H.59 Ligands: EDO.12 Ligand excluded by PLIP EDO.12: 3 residues within 4Å: Chain A: H.59 Ligands: EDO.11, EDO.13 Ligand excluded by PLIP EDO.13: 7 residues within 4Å: Chain A: H.59, I.99, G.100, V.105, P.106 Ligands: EDO.12, EDO.14 Ligand excluded by PLIP EDO.14: 6 residues within 4Å: Chain A: H.59, D.60, G.100, V.105 Ligands: EDO.13, EDO.15 Ligand excluded by PLIP EDO.15: 10 residues within 4Å: Chain A: A.40, A.41, D.60, V.61, D.62, G.100, H.101, G.102, V.105 Ligands: EDO.14 Ligand excluded by PLIP EDO.16: 6 residues within 4Å: Chain A: D.62, T.64, A.65, P.97, G.102 Ligands: EDO.6 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sampathkumar, P. et al., Structures of the autoproteolytic domain from the Saccharomyces cerevisiae nuclear pore complex component, Nup145. Proteins (2010)

Release Date

2009-12-22

Peptides

Nucleoporin NUP145: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Nucleoporin NUP145

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