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SMTL ID : 3khc.1

Crystal Structure of Escherichia coli AlkB in complex with ssDNA containing a 1-methylguanine lesion

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.20 Å
Oligo State
homo-dimer
Ligands
1 x DT- DA- MG1- DT- DG- DC- DC- DT: DNA (5'-D(P*TP*AP*(MG1)P*TP*GP*CP*CP*T)-3')(Non-covalent)
1 x DG- DC- DA- DT: DNA (5'-D(P*GP*CP*AP*T)-3')(Non-functional Binders)
2 x CO: COBALT (II) ION(Non-covalent)
2 x AKG: 2-OXOGLUTARIC ACID(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Holland, P.J. et al., Structural and mutational analysis of Escherichia coli AlkB provides insight into substrate specificity and DNA damage searching. Plos One (2010)
Release Date
2010-01-12
Peptides
Alpha-ketoglutarate-dependent dioxygenase alkB: AB
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B

Alpha-ketoglutarate-dependent dioxygenase alkB