SMTL ID : 3ki0.1

Catalytic fragment of Cholix toxin from Vibrio Cholerae in complex with inhibitor GP-D

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.29 Å

Oligo State

monomer

Ligands

2 x G9D: 3-(morpholin-4-ylmethyl)-1,5-dihydro-6H-[1,2]diazepino[4,5,6-cd]indol-6-one(Non-covalent)

G9D.1: 10 residues within 4Å: Chain A: Y.37, H.38, G.39, Y.71, V.72, A.73, V.78, A.79, Y.82, E.159 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.71, A:Y.71, A:A.73, A:V.78, A:Y.82, A:E.159 Hydrogen bonds: A:G.39, A:G.39, A:E.159, A:E.159 pi-Stacking: A:Y.82 G9D.2: 5 residues within 4Å: Chain A: L.27, E.30, Y.32, V.171, I.173 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.27, A:V.171, A:V.171, A:I.173

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 6 residues within 4Å: Chain A: N.41, H.42, I.85, A.102, R.103, G.104 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jorgensen, R. et al., Structure function analysis of soluble inhibitors of cholix toxin from Vibrio cholerae. To be Published

Release Date

2010-10-27

Peptides

Cholix toxin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cholix toxin

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