SMTL ID : 3kn1.2 (1 other biounit)

Crystal Structure of Golgi Phosphoprotein 3 N-term Truncation Variant

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-24-mer

Ligands

144 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.2: 3 residues within 4Å: Chain A: T.111, W.112, N.113 Ligand excluded by PLIP SO4.3: 2 residues within 4Å: Chain A: R.51, R.53 Ligand excluded by PLIP SO4.4: 2 residues within 4Å: Chain A: R.185, R.186 Ligand excluded by PLIP SO4.5: 4 residues within 4Å: Chain A: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.6: 3 residues within 4Å: Chain A: W.176, N.178, R.218 Ligand excluded by PLIP SO4.7: 4 residues within 4Å: Chain B: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.8: 3 residues within 4Å: Chain B: T.111, W.112, N.113 Ligand excluded by PLIP SO4.9: 2 residues within 4Å: Chain B: R.51, R.53 Ligand excluded by PLIP SO4.10: 2 residues within 4Å: Chain B: R.185, R.186 Ligand excluded by PLIP SO4.11: 4 residues within 4Å: Chain B: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.12: 3 residues within 4Å: Chain B: W.176, N.178, R.218 Ligand excluded by PLIP SO4.13: 4 residues within 4Å: Chain C: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.14: 3 residues within 4Å: Chain C: T.111, W.112, N.113 Ligand excluded by PLIP SO4.15: 2 residues within 4Å: Chain C: R.51, R.53 Ligand excluded by PLIP SO4.16: 2 residues within 4Å: Chain C: R.185, R.186 Ligand excluded by PLIP SO4.17: 4 residues within 4Å: Chain C: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.18: 3 residues within 4Å: Chain C: W.176, N.178, R.218 Ligand excluded by PLIP SO4.19: 4 residues within 4Å: Chain D: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.20: 3 residues within 4Å: Chain D: T.111, W.112, N.113 Ligand excluded by PLIP SO4.21: 2 residues within 4Å: Chain D: R.51, R.53 Ligand excluded by PLIP SO4.22: 2 residues within 4Å: Chain D: R.185, R.186 Ligand excluded by PLIP SO4.23: 4 residues within 4Å: Chain D: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.24: 3 residues within 4Å: Chain D: W.176, N.178, R.218 Ligand excluded by PLIP SO4.25: 4 residues within 4Å: Chain E: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.26: 3 residues within 4Å: Chain E: T.111, W.112, N.113 Ligand excluded by PLIP SO4.27: 2 residues within 4Å: Chain E: R.51, R.53 Ligand excluded by PLIP SO4.28: 2 residues within 4Å: Chain E: R.185, R.186 Ligand excluded by PLIP SO4.29: 4 residues within 4Å: Chain E: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.30: 3 residues within 4Å: Chain E: W.176, N.178, R.218 Ligand excluded by PLIP SO4.31: 4 residues within 4Å: Chain F: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.32: 3 residues within 4Å: Chain F: T.111, W.112, N.113 Ligand excluded by PLIP SO4.33: 2 residues within 4Å: Chain F: R.51, R.53 Ligand excluded by PLIP SO4.34: 2 residues within 4Å: Chain F: R.185, R.186 Ligand excluded by PLIP SO4.35: 4 residues within 4Å: Chain F: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.36: 3 residues within 4Å: Chain F: W.176, N.178, R.218 Ligand excluded by PLIP SO4.37: 4 residues within 4Å: Chain G: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.38: 3 residues within 4Å: Chain G: T.111, W.112, N.113 Ligand excluded by PLIP SO4.39: 2 residues within 4Å: Chain G: R.51, R.53 Ligand excluded by PLIP SO4.40: 2 residues within 4Å: Chain G: R.185, R.186 Ligand excluded by PLIP SO4.41: 4 residues within 4Å: Chain G: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.42: 3 residues within 4Å: Chain G: W.176, N.178, R.218 Ligand excluded by PLIP SO4.43: 4 residues within 4Å: Chain H: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.44: 3 residues within 4Å: Chain H: T.111, W.112, N.113 Ligand excluded by PLIP SO4.45: 2 residues within 4Å: Chain H: R.51, R.53 Ligand excluded by PLIP SO4.46: 2 residues within 4Å: Chain H: R.185, R.186 Ligand excluded by PLIP SO4.47: 4 residues within 4Å: Chain H: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.48: 3 residues within 4Å: Chain H: W.176, N.178, R.218 Ligand excluded by PLIP SO4.49: 4 residues within 4Å: Chain I: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.50: 3 residues within 4Å: Chain I: T.111, W.112, N.113 Ligand excluded by PLIP SO4.51: 2 residues within 4Å: Chain I: R.51, R.53 Ligand excluded by PLIP SO4.52: 2 residues within 4Å: Chain I: R.185, R.186 Ligand excluded by PLIP SO4.53: 4 residues within 4Å: Chain I: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.54: 3 residues within 4Å: Chain I: W.176, N.178, R.218 Ligand excluded by PLIP SO4.55: 4 residues within 4Å: Chain J: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.56: 3 residues within 4Å: Chain J: T.111, W.112, N.113 Ligand excluded by PLIP SO4.57: 2 residues within 4Å: Chain J: R.51, R.53 Ligand excluded by PLIP SO4.58: 2 residues within 4Å: Chain J: R.185, R.186 Ligand excluded by PLIP SO4.59: 4 residues within 4Å: Chain J: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.60: 3 residues within 4Å: Chain J: W.176, N.178, R.218 Ligand excluded by PLIP SO4.61: 4 residues within 4Å: Chain K: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.62: 3 residues within 4Å: Chain K: T.111, W.112, N.113 Ligand excluded by PLIP SO4.63: 2 residues within 4Å: Chain K: R.51, R.53 Ligand excluded by PLIP SO4.64: 2 residues within 4Å: Chain K: R.185, R.186 Ligand excluded by PLIP SO4.65: 4 residues within 4Å: Chain K: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.66: 3 residues within 4Å: Chain K: W.176, N.178, R.218 Ligand excluded by PLIP SO4.67: 4 residues within 4Å: Chain L: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.68: 3 residues within 4Å: Chain L: T.111, W.112, N.113 Ligand excluded by PLIP SO4.69: 2 residues within 4Å: Chain L: R.51, R.53 Ligand excluded by PLIP SO4.70: 2 residues within 4Å: Chain L: R.185, R.186 Ligand excluded by PLIP SO4.71: 4 residues within 4Å: Chain L: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.72: 3 residues within 4Å: Chain L: W.176, N.178, R.218 Ligand excluded by PLIP SO4.73: 4 residues within 4Å: Chain M: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.74: 3 residues within 4Å: Chain M: T.111, W.112, N.113 Ligand excluded by PLIP SO4.75: 2 residues within 4Å: Chain M: R.51, R.53 Ligand excluded by PLIP SO4.76: 2 residues within 4Å: Chain M: R.185, R.186 Ligand excluded by PLIP SO4.77: 4 residues within 4Å: Chain M: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.78: 3 residues within 4Å: Chain M: W.176, N.178, R.218 Ligand excluded by PLIP SO4.79: 4 residues within 4Å: Chain N: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.80: 3 residues within 4Å: Chain N: T.111, W.112, N.113 Ligand excluded by PLIP SO4.81: 2 residues within 4Å: Chain N: R.51, R.53 Ligand excluded by PLIP SO4.82: 2 residues within 4Å: Chain N: R.185, R.186 Ligand excluded by PLIP SO4.83: 4 residues within 4Å: Chain N: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.84: 3 residues within 4Å: Chain N: W.176, N.178, R.218 Ligand excluded by PLIP SO4.85: 4 residues within 4Å: Chain O: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.86: 3 residues within 4Å: Chain O: T.111, W.112, N.113 Ligand excluded by PLIP SO4.87: 2 residues within 4Å: Chain O: R.51, R.53 Ligand excluded by PLIP SO4.88: 2 residues within 4Å: Chain O: R.185, R.186 Ligand excluded by PLIP SO4.89: 4 residues within 4Å: Chain O: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.90: 3 residues within 4Å: Chain O: W.176, N.178, R.218 Ligand excluded by PLIP SO4.91: 4 residues within 4Å: Chain P: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.92: 3 residues within 4Å: Chain P: T.111, W.112, N.113 Ligand excluded by PLIP SO4.93: 2 residues within 4Å: Chain P: R.51, R.53 Ligand excluded by PLIP SO4.94: 2 residues within 4Å: Chain P: R.185, R.186 Ligand excluded by PLIP SO4.95: 4 residues within 4Å: Chain P: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.96: 3 residues within 4Å: Chain P: W.176, N.178, R.218 Ligand excluded by PLIP SO4.97: 4 residues within 4Å: Chain Q: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.98: 3 residues within 4Å: Chain Q: T.111, W.112, N.113 Ligand excluded by PLIP SO4.99: 2 residues within 4Å: Chain Q: R.51, R.53 Ligand excluded by PLIP SO4.100: 2 residues within 4Å: Chain Q: R.185, R.186 Ligand excluded by PLIP SO4.101: 4 residues within 4Å: Chain Q: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.102: 3 residues within 4Å: Chain Q: W.176, N.178, R.218 Ligand excluded by PLIP SO4.103: 4 residues within 4Å: Chain R: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.104: 3 residues within 4Å: Chain R: T.111, W.112, N.113 Ligand excluded by PLIP SO4.105: 2 residues within 4Å: Chain R: R.51, R.53 Ligand excluded by PLIP SO4.106: 2 residues within 4Å: Chain R: R.185, R.186 Ligand excluded by PLIP SO4.107: 4 residues within 4Å: Chain R: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.108: 3 residues within 4Å: Chain R: W.176, N.178, R.218 Ligand excluded by PLIP SO4.109: 4 residues within 4Å: Chain S: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.110: 3 residues within 4Å: Chain S: T.111, W.112, N.113 Ligand excluded by PLIP SO4.111: 2 residues within 4Å: Chain S: R.51, R.53 Ligand excluded by PLIP SO4.112: 2 residues within 4Å: Chain S: R.185, R.186 Ligand excluded by PLIP SO4.113: 4 residues within 4Å: Chain S: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.114: 3 residues within 4Å: Chain S: W.176, N.178, R.218 Ligand excluded by PLIP SO4.115: 4 residues within 4Å: Chain T: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.116: 3 residues within 4Å: Chain T: T.111, W.112, N.113 Ligand excluded by PLIP SO4.117: 2 residues within 4Å: Chain T: R.51, R.53 Ligand excluded by PLIP SO4.118: 2 residues within 4Å: Chain T: R.185, R.186 Ligand excluded by PLIP SO4.119: 4 residues within 4Å: Chain T: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.120: 3 residues within 4Å: Chain T: W.176, N.178, R.218 Ligand excluded by PLIP SO4.121: 4 residues within 4Å: Chain U: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.122: 3 residues within 4Å: Chain U: T.111, W.112, N.113 Ligand excluded by PLIP SO4.123: 2 residues within 4Å: Chain U: R.51, R.53 Ligand excluded by PLIP SO4.124: 2 residues within 4Å: Chain U: R.185, R.186 Ligand excluded by PLIP SO4.125: 4 residues within 4Å: Chain U: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.126: 3 residues within 4Å: Chain U: W.176, N.178, R.218 Ligand excluded by PLIP SO4.127: 4 residues within 4Å: Chain V: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.128: 3 residues within 4Å: Chain V: T.111, W.112, N.113 Ligand excluded by PLIP SO4.129: 2 residues within 4Å: Chain V: R.51, R.53 Ligand excluded by PLIP SO4.130: 2 residues within 4Å: Chain V: R.185, R.186 Ligand excluded by PLIP SO4.131: 4 residues within 4Å: Chain V: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.132: 3 residues within 4Å: Chain V: W.176, N.178, R.218 Ligand excluded by PLIP SO4.133: 4 residues within 4Å: Chain W: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.134: 3 residues within 4Å: Chain W: T.111, W.112, N.113 Ligand excluded by PLIP SO4.135: 2 residues within 4Å: Chain W: R.51, R.53 Ligand excluded by PLIP SO4.136: 2 residues within 4Å: Chain W: R.185, R.186 Ligand excluded by PLIP SO4.137: 4 residues within 4Å: Chain W: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.138: 3 residues within 4Å: Chain W: W.176, N.178, R.218 Ligand excluded by PLIP SO4.139: 4 residues within 4Å: Chain X: W.32, N.123, V.124, R.125 Ligand excluded by PLIP SO4.140: 3 residues within 4Å: Chain X: T.111, W.112, N.113 Ligand excluded by PLIP SO4.141: 2 residues within 4Å: Chain X: R.51, R.53 Ligand excluded by PLIP SO4.142: 2 residues within 4Å: Chain X: R.185, R.186 Ligand excluded by PLIP SO4.143: 4 residues within 4Å: Chain X: N.157, N.159, I.160, R.163 Ligand excluded by PLIP SO4.144: 3 residues within 4Å: Chain X: W.176, N.178, R.218 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wood, C.S. et al., PtdIns4P recognition by Vps74/GOLPH3 links PtdIns 4-kinase signaling to retrograde Golgi trafficking. J.Cell Biol. (2009)

Release Date

2009-12-15

Peptides

Golgi phosphoprotein 3: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

I
A

J
A

K
A

L
A

M
A

N
A

O
A

P
A

Q
A

R
A

S
A

T
A

U
A

V
A

W
A

X
A

Golgi phosphoprotein 3

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