SMTL ID : 3kp5.1

Staphylococcus epidermidis TcaR in complex with kanamycin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-dimer

Ligands

2 x KAN: KANAMYCIN A(Non-covalent)

KAN.1: 14 residues within 4Å: Chain A: V.19, N.20, T.23, Q.31, A.38, E.39, S.41, H.42, N.45, Q.61, R.110 Chain B: E.13, N.17, Q.61 15 PLIP interactions: 11 interactions with chain A, 4 interactions with chain B Hydrogen bonds: A:T.23, A:Q.31, A:A.38, A:N.45, A:N.45, A:Q.61, A:Q.61, A:R.110, B:N.17, B:Q.61 Salt bridges: A:H.42, A:H.42, A:R.110 Water bridges: B:E.13, B:E.13 KAN.2: 3 residues within 4Å: Chain B: A.66, R.70, K.74 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:R.70, B:R.70, B:K.74 Salt bridges: B:R.70, B:R.70, B:K.74

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chang, Y.M. et al., Structural study of TcaR and its complexes with multiple antibiotics from Staphylococcus epidermidis. Proc.Natl.Acad.Sci.USA (2010)

Release Date

2010-06-09

Peptides

Transcriptional regulator TcaR: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Transcriptional regulator TcaR

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