SMTL ID : 3kph.1

Crystal structure of Mycoplasma arthritidis-derived mitogen

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

homo-dimer

Ligands

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 4 residues within 4Å: Chain A: Y.71, I.127, Q.134, W.137 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:Q.134, A:W.137 PO4.2: 6 residues within 4Å: Chain A: D.210 Chain B: H.63, I.67, Y.71, D.120, L.123 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.120 Salt bridges: B:H.63 PO4.3: 4 residues within 4Å: Chain A: E.180 Chain B: L.136, N.177, E.180 4 PLIP interactions: 3 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:N.177, B:N.177, B:E.180, A:E.180

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, L. et al., Crystal Structure of the Mycoplasma arthritidis-Derived Mitogen in Apo Form Reveals a 3D Domain-Swapped Dimer. J.Mol.Biol. (2010)

Release Date

2010-05-12

Peptides

Superantigen: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Superantigen