SMTL ID : 3kpz.1

Crystal structure of a novel vitamin D3 analogue, ZK203278 showing dissociated profile

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x ZNE: (1R,3S,5Z)-5-[(2E)-2-{(1R,3aS,7aR)-1-[(1R,5S)-5-hydroxy-1-methyl-5-(1,3-thiazol-2-yl)pentyl]-7a-methyloctahydro-4H-inden-4-ylidene}ethylidene]-4-methylidenecyclohexane-1,3-diol(Non-covalent)

ZNE.1: 22 residues within 4Å: Chain A: Y.26, Y.30, L.62, A.63, L.65, V.66, S.69, I.103, R.106, S.107, S.110, W.118, C.120, Y.127, V.132, H.137, L.141, L.145, H.229, Y.233, L.246, V.250 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:Y.26, A:L.62, A:L.65, A:V.66, A:W.118, A:W.118, A:Y.127, A:V.132, A:L.141 Hydrogen bonds: A:Y.26, A:S.69, A:R.106, A:R.106, A:S.110, A:H.137

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Rochel, N. et al., Crystal structure of a vitamin D3 analog, ZK203278, showing dissociated profile. Anticancer Res. (2012)

Release Date

2011-10-12

Peptides

Vitamin D3 receptor: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Vitamin D3 receptor

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