SMTL ID : 3kq7.1

Structure of human p38alpha with N-[4-methyl-3-(6-{[2-(1-methylpyrrolidin-2-yl)ethyl]amino}pyridine-3-amido)phenyl]-2-(morpholin-4-yl)pyridine-4-carboxamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x KQ7: N-(2-methyl-5-{[(2-morpholin-4-ylpyridin-4-yl)carbonyl]amino}phenyl)-6-({2-[(2S)-1-methylpyrrolidin-2-yl]ethyl}amino)py ridine-3-carboxamide(Non-covalent)

KQ7.1: 24 residues within 4Å: Chain A: V.58, A.71, K.73, E.91, L.94, L.95, M.98, V.103, I.104, L.124, T.126, H.127, L.128, M.129, G.130, D.132, N.135, I.161, I.166, H.168, I.186, L.187, D.188, F.189 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:V.58, A:K.73, A:E.91, A:L.95, A:I.104, A:L.124, A:T.126, A:M.129, A:D.132, A:D.188, A:F.189 Hydrogen bonds: A:K.73, A:E.91, A:T.126, A:T.126, A:M.129, A:M.129, A:D.188 pi-Stacking: A:F.189

5 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 1 residues within 4Å: Chain A: K.96 6 PLIP interactions: 6 interactions with chain A Water bridges: A:K.96, A:K.96, A:H.97, A:K.99 Salt bridges: A:K.96, A:K.99 ACT.3: 4 residues within 4Å: Chain A: Y.89, S.346, F.347, R.350 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.347 Water bridges: A:S.346 Salt bridges: A:R.350 ACT.4: 5 residues within 4Å: Chain A: S.163, A.164, D.165, P.342, Y.343 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.165, A:Y.343 Water bridges: A:Q.345 ACT.5: 6 residues within 4Å: Chain A: A.177, V.178, N.179, E.183, L.184, K.185 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:E.183 Water bridges: A:V.178 ACT.6: 3 residues within 4Å: Chain A: V.339, A.340, D.341 1 PLIP interactions: 1 interactions with chain A Water bridges: A:V.339

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cheng, R.K.Y. et al., Structure of human p38alpha with N-[4-methyl-3-(6-{[2-(1-methylpyrrolidin-2-yl)ethyl]amino}pyridine-3-amido)phenyl]-2-(morpholin-4-yl)pyridine-4-carboxamide. TO BE PUBLISHED

Release Date

2009-12-01

Peptides

Mitogen-activated protein kinase p38 alpha: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Mitogen-activated protein kinase p38 alpha

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